IP Library › Granted Patent US 10,287,266
Granted Patent B2
US 10,287,266 · App. 15/736,925 · Granted May 14, 2019

Compounds and compositions for inhibiting the activity of SHP2

Inventors: Zhuoliang Chen (Belmont, MA); Jorge Garcia Fortanet (Wilmington, MA); Andriana Jouk (Cambridge, MA); Rajesh Karki (Quincy, MA); Matthew J. LaMarche (Reading, MA); Gang Liu (Waltham, MA); Mark G. Palermo (Rindge, NH); Lawrence Blas Perez (Silver Spring, MD); Patrick James Sarver (Princeton, NJ); Michael David Shultz (Lexington, MA); Martin Sendzik (Belmont, MA); Bakary-Barry Toure (Weston, MA); Bing Yu (Belmont, MA)
Assignee: Novartis AG
C07D401/14C07D401/04C07D471/10C07D491/107C07D498/10
View Patent ↗
Loading inventors, assignments & file history…
Monitor This Case
Get email alerts when status or documents change.
Order Certified Copies
Most orders are placed with the USPTO same day — all within 24 business hours.
Order via The Patent Place →
Pre-filled with this patent's details
Quick Facts
Patent No.
US 10,287,266
App. No.
15/736,925
Granted
May 14, 2019
Kind
B2
Abstract

The present invention relates to compounds of formula I: in which Y 1 , Y 2 , Y3, R 1 , R 2 , R 4a , R 4b , R 5a , R 5b , R 6a and R 6b are defined in the Summary of the Invention; capable of inhibiting the activity of SHP2. The invention further provides a process for the preparation of compounds of the invention, pharmaceutical preparations comprising such compounds and methods of using such compounds and compositions in the management of diseases or disorders associated with the aberrant activity of SHP2.

Claims (80)

1. A compound of formula I:

in which:

Y 1 is selected from N and CR 7 ; wherein R 7 is selected from hydrogen, halo and amino;

Y 2 is selected from N and CR 8 ; wherein R 8 is selected from hydrogen, halo, C 1-4 alkyl, halo-substituted-C 1-2 alkyl, halo-substituted-C 1-2 alkoxy and amino;

Y 3 is selected from N, CR 9 and C(O); wherein R 9 is selected from hydrogen, amino, cyano, halo, C 1-2 alkoxy, halo-substituted-C 1-2 alkyl, halo-substituted-sulfanyl, C 1-3 alkyl, cyclopropyl, cyclopropyl-carbonyl-amino, C 1-2 alkyl-carbonyl-amino, morpholino-methyl and hydroxy;

wherein if Y 3 is C(O), Y 2 is selected from NH and —N—C 1-4 alkyl and the ring containing Y 1 , Y 2 and Y 3 has no more than 2 double bonds;

R 1 is selected from hydrogen, halo, halo-substituted-C 1-2 alkyl, halo-substituted-C 1-2 alkoxy, hydroxy-substituted-C 1-2 alkyl, C 1-4 alkyl, C 1-4 alkoxy, amino and cyano; or R 1 and R 9 together with the carbon atoms to which R 1 and R 9 are attached form cyclopentene or 1,3-dioxole, 2,3-dihydrofuran;

R 2 is selected from hydrogen, C 1-4 alkyl and fluoro;

R 4a and R 4b are each independently selected from hydrogen, hydroxy and fluoro; with proviso that R 4a and R 4b cannot both be OH; with the proviso that R 4a and R 4b cannot be OH and F simultaneously;

R 5a is selected from amino and amino-methyl;

R 5b is selected from OH, amino, fluoro, C 1-6 alkyl, methoxy-carbonyl, C 3-6 cycloalkyl-C 1-3 alkyl, hydroxy-substituted C 1-3 alkyl, C 1-2 alkoxy-substituted C 1-3 alkyl and a 5 to 6 member heteroaryl ring containing 1 to 4 heteroatoms selected from O, S and N; wherein said C 1-6 alkyl or C 1-2 alkoxy-substituted C 1-3 alkyl of R 5b is unsubstituted or substituted with 1-3 fluorines; with the proviso that if R 5a is amino, R 5b cannot be OH, amino or fluoro; or R 5a and R 5b , together with the carbon atom to which R 5a and R 5b are attached, form a group selected from:

wherein *C represents the carbon atom to which R 5a and R 5b are attached; R 10 is amino; R 11a is selected from hydrogen, hydroxy, fluoro, C 1-3 alkyl, halo-substituted-C 1-2 alkyl and hydroxy-methyl; R 11b is selected from fluoro, methyl and hydrogen; with the proviso that when R 11a is hydroxyl, R 11b is not fluoro; R 11c is selected from hydrogen, C 1-3 alkyl and hydroxy-methyl; R 12 is selected from hydrogen, halo, hydroxy, C 1-3 alkyl, halo-substituted-C 1-3 alkyl, halo-substituted-C 1-3 alkoxy and C 1-3 alkoxy; R 13 is selected from hydrogen, halo and C 1-2 alkyl; with the proviso that when R 12 is hydroxy, R 13 is not fluoro; R 14 is selected from hydrogen and fluoro; R 15 is selected from hydrogen and fluoro; and

R 6a and R 6b are each independently selected from hydrogen, hydroxy and fluoro; with proviso that R 6a and R 6b cannot both be OH and fluoro simultaneously; or the pharmaceutically acceptable salts thereof; with the proviso that compounds of formula I do not include a compound selected from: (R)-8-(5-((2-(tert-butyl)phenyl)thio)pyrazin-2-yl)-8-azaspiro[4.5]decan-1-amine; (R)-8-(5-((2-(trifluoromethyl)phenyl)thio)pyrazin-2-yl)-8-azaspiro[4.5]decan-1-amine; (R)-8-(5-((2-aminophenyl)thio)pyrazin-2-yl)-8-azaspiro[4.5]decan-1-amine; (R)-8-(5-((2,3,5,6-tetrafluorophenyl)thio)pyrazin-2-yl)-8-azaspiro[4.5]decan-1-amine; (R)-8-(5-(pyridin-3-ylthio)pyrazin-2-yl)-8-azaspiro[4.5]decan-1-amine; (R)-8-(5-((3-(trifluoromethoxy)phenyl)thio)pyrazin-2-yl)-8-azaspiro[4.5]decan-1-amine; (S)-8-(5-((2-(tert-butyl)phenyl)thio)pyrazin-2-yl)-8-azaspiro[4.5]decan-1-amine; and (S)-8-(5-((4-(tert-butyl)phenyl)thio)pyrazin-2-yl)-8-azaspiro[4.5]decan-1-amine.

2. The compound of claim 1 of formula Ia:

in which:

R 1 is selected from hydrogen, halo, halo-substituted-C 1-2 alkyl, halo-substituted-C 1-2 alkoxy, C 1-4 alkoxy, amino and cyano;

R 4 is selected from hydrogen, hydroxy and fluoro;

R 7 is selected from hydrogen, halo and amino;

R 9 is selected from hydrogen, methyl, methoxy, ethoxy, hydroxy, hydroxy-methyl, trifluoro-methyl, cyclopropyl, morpholino-methyl, cyano, methyl-carbonyl-amino, cyclopropyl-carbonyl-amino, pentafluoro-λ 6 -sulfanyl, amino and halo; or R 1 and R 9 together with the carbon atoms to which R 1 and R 9 are attached form cyclopentene;

R 10 is amino;

R 11a is selected from hydrogen, fluoro, methyl, ethyl, isopropyl, trifluoromethyl, hydroxy and hydroxy-methyl;

R 11b is selected from fluoro and hydrogen; with the proviso that when R 11a is hydroxyl, R 11b is not fluoro;

R 12 is selected from hydrogen, halo, hydroxy, C 1-3 alkyl, halo-substituted-C 1-3 alkyl, halo-substituted-C 1-3 alkoxy and C 1-3 alkoxy;

R 13 is selected from hydrogen, fluoro and C 1-2 alkyl; with the proviso that when R 12 is hydroxy, R 13 is not fluoro;

R 14 is selected from hydrogen and fluoro;

R 15 is selected from hydrogen and fluoro; and

Y 2 is selected from N and CR 8 ; wherein R 8 is selected from hydrogen, halo, C 1-4 alkyl, halo-substituted-C 1-2 alkyl, halo-substituted-C 1-2 alkoxy and amino; or the pharmaceutically acceptable salts thereof.

3. The compound of claim 2 in which:

R 1 is selected from hydrogen, bromo, chloro, fluoro, methyl, isopropyl, t-butyl, fluoro-substituted methyl, methoxy, trifluoro-methyl, trifluoromethoxy, amino and cyano;

R 4 is selected from hydrogen and hydroxy;

R 7 is selected from hydrogen, fluoro, chloro and amino;

R 9 is selected from hydrogen, methyl, methoxy, ethoxy, hydroxy, hydroxy-methyl, cyclopropyl, amino, trifluoromethyl, morpholino-methyl, cyclopropyl-carbonyl-amino, methyl-carbonyl-amino, pentafluoro-λ 6 -sulfanyl, cyano, bromo, chloro and fluoro; or R 1 and R 9 together with the carbon atoms to which R 1 and R 9 are attached form cyclopentene;

R 10 is amino;

R 11a is selected from hydrogen, hydroxy, methyl and hydroxy-methyl;

R 11b is selected from fluoro and hydrogen; with the proviso that when R 11a is hydroxyl, R 11b is not fluoro;

R 12 is selected from hydrogen, fluoro, hydroxy, methyl and methoxy; and

R 13 is selected from hydrogen, fluoro and methyl; with the proviso that when R 12 is hydroxy, R 13 is not fluoro; and

Y 2 is selected from CR 8 and N; wherein R 8 is selected from hydrogen, chloro, fluoro, ethyl, trifluoromethyl, trifluoromethoxy and t-butyl; or the pharmaceutically acceptable salts thereof.

4. The compound of claim 3 , or a pharmaceutically acceptable salt thereof, selected from:

5. The compound of claim 1 of formula Ib:

in which:

R 1 is selected from hydrogen, halo, halo-substituted-C 1-2 alkyl, C 1-2 alkyl and cyano;

R 4 is selected from hydrogen, fluoro and hydroxy;

R 7 is selected from hydrogen, halo and amino;

R 9 is selected from hydrogen, methyl, methoxy, ethoxy, hydroxy, hydroxy-methyl, trifluoro-methyl, cyclopropyl, morpholino-methyl, cyano, methyl-carbonyl-amino, cyclopropyl-carbonyl-amino, pentafluoro-λ 6 -sulfanyl, amino and halo;

R 10 is amino;

R 11c is selected from hydrogen, ethyl, isopropyl, hydroxy-methyl and methyl;

Y 2 is selected from CR 8 and N; wherein R 8 is selected from hydrogen, chloro, fluoro, ethyl, trifluoromethyl, trifluoromethoxy and t-butyl; or the pharmaceutically acceptable salts thereof.

6. The compound of claim 5 in which:

R 1 is selected from hydrogen, chloro, fluoro, methyl, fluoro-substituted methyl and cyano;

R 4 is selected from hydrogen;

R 7 is selected from hydrogen, fluoro, chloro and amino;

R 9 is selected from hydrogen, amino, hydroxy, trifluoromethyl, methyl-carbonyl, hydroxy-methyl, chloro and fluoro;

R 10 is amino;

R 11c is selected from hydrogen, ethyl, isopropyl, hydroxy-methyl and methyl;

Y 2 is selected from CR 8 and N; wherein R 8 is selected from hydrogen, chloro, fluoro, ethyl, trifluoromethyl, trifluoromethoxy and t-butyl; or the pharmaceutically acceptable salts thereof.

7. The compound of claim 6 , or a pharmaceutically acceptable salt thereof, selected from:

8. The compound of claim 1 , or a pharmaceutically acceptable salt thereof, selected from:

9. The compound of claim 1 of formula Ic:

in which:

Y 2 is selected from N and CR 8 ; wherein R 8 is selected from hydrogen and amino;

Y 3 is selected from N and CR 9 ; wherein R 9 is selected from hydrogen, methyl, methoxy, ethoxy, hydroxy, hydroxy-methyl, trifluoro-methyl, cyclopropyl, morpholino-methyl, cyano, methyl-carbonyl-amino, cyclopropyl-carbonyl-amino, pentafluoro-λ 6 -sulfanyl, amino and halo;

R 1 is selected from halo, halo-substituted-C 1-2 alkyl, C 1-2 alkyl and cyano;

R 2 is hydrogen;

R 4 is selected from hydrogen, hydroxy and fluoro;

R 5a is selected from amino and amino-methyl;

R 5b is selected from OH, amino, fluoro, C 1-6 alkyl, methoxy-carbonyl, C 3-6 cycloalkyl-C 1-3 alkyl, hydroxy-substituted C 1-3 alkyl, C 1-2 alkoxy-substituted C 1-3 alkyl and a 5 to 6 member heteroaryl ring containing 1 to 4 heteroatoms selected from O, S and N; wherein said C 1-6 alkyl or C 1-2 alkoxy-substituted C 1-3 alkyl of R 5b is unsubstituted or substituted with 1-3 fluorines; with the proviso that if R 5a is amino, R 5b cannot simultaneously be OH, amino or fluoro;

R 7 is selected from hydrogen, halo and amino; or a pharmaceutically acceptable salt thereof.

10. The compound of claim 9 in which:

Y 2 is selected from N and CR 8 ; wherein R 8 is selected from hydrogen and amino;

Y 3 is selected from N and CR 9 ; wherein R 9 is selected from hydrogen, amino, halo and hydroxy;

R 1 is selected from halo, halo-substituted-C 1-2 alkyl and cyano;

R 2 is selected from hydrogen and halo;

R 4 is selected from hydrogen and hydroxy;

R 5a is selected from amino and amino-methyl;

R 5b is selected from OH, methyl, ethyl, propyl, isopropyl, isobutyl, amino, amino-methyl, methoxy-carbonyl, pyridinyl and hydroxy-methyl; with the proviso that if R 5a is amino, R 5b cannot be OH, amino or fluoro;

R 7 is selected from hydrogen, halo and amino; or a pharmaceutically acceptable salt thereof.

11. The compound of claim 10 , or a pharmaceutically acceptable salt thereof, selected from:

12. A pharmaceutical composition comprising a compound of claim 1 or a pharmaceutically acceptable salt thereof, and at least one pharmaceutically acceptable carrier.

13. A method of therapeutic treatment comprising administering a compound of claim 1 , or a pharmaceutically acceptable salt thereof, to a person in need of such treatment in an effective amount for the therapeutic treatment of a disease or disorder which is mediated by the activity of SHP2 selected from Noonan Syndrome and Leopard Syndrome.

Assignments (4)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jul 5, 2018
From: CHEN, ZHUOLIANG; FORTANET, JORGE GARCIA; JOUK, ANDRIANA; KARKI, RAJESH; LAMARCHE, MATTHEW J.; LIU, GANG; PALERMO, MARK G.; PEREZ, LAWRENCE BLAS; SARVER, PATRICK JAMES; SHULTZ, MICHAEL DAVID; SENDZIK, MARTIN; YU, BING
To: NOVARTIS INSTITUTES FOR BIOMEDICAL RESEARCH, INC.
Reel/Frame 046271/0435 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jul 5, 2018
From: NOVARTIS INSTITUTES FOR BIOMEDICAL RESEARCH, INC.
To: NOVARTIS AG
Reel/Frame 046271/0498 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jul 5, 2018
From: TOURE, BAKARY-BARRY
To: NOVARTIS INSTITUTES FOR BIOMEDICAL RESEARCH, INC.
Reel/Frame 046271/0562 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jul 5, 2018
From: NOVARTIS INSTITUTES FOR BIOMEDICAL RESEARCH, INC.
To: NOVARTIS AG
Reel/Frame 046271/0601 →
Continuity (2)
Provisional Application 62181893 · Jun 19, 2015
Related Publication 20180186770A1 · Jul 5, 2018
Cited By (3)
US 12,233,062 US 12,338,246 US 12,390,469