IP Library › Granted Patent US 12,729,236
Granted Patent B2
US 12,729,236 · App. 17/622,467 · Granted Sep 8, 2026

Hydrophilic linkers for antibody or DARPin conjugates

Inventors: Wesley M. Jackson (Berkley, CA); Amy A. Twite (Berkeley, CA); Livia Wilz Brier (Berkeley, CA)
Assignee: VALITOR, INC.
C07K16/241A61K9/0019A61K47/61A61P29/00A61P35/00A61K39/00C07K2317/94C07K2319/31
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Quick Facts
Patent No.
US 12,729,236
App. No.
17/622,467
Granted
Sep 8, 2026
Kind
B2
Abstract

The present disclosure is directed to peptide-polymer conjugates utilizing hydrophilic linkers, and their use in treating diseases or disorders. In one embodiment, the present invention provides a conjugate of Formula I: (X—Y)n-Z Formula (I) wherein each X is independently a peptide having a molecular weight of from about 5 kDa to about 200 kDa; each Y is independently a hydrophilic linker; Z is a biocompatible polymer having a molecular weight of from about 0.1 MDa to about 3 MDa; and subscript n is an integer from 10 to 1000.

Claims (43)

1 . A conjugate of Formula I:

(

X

-

Y

)

n

-

Z

Formula

⁢

(

I

)

wherein

each X is independently a peptide, wherein the peptide is an antibody or a DARPin;

each Y is independently a hydrophilic linker, wherein the hydrophilic linker corresponds to any one of the following:

1-[3-({[2-(3-Hydrazino-3-oxopropoxy)ethoxy]methyl}amino)-3-oxopropyl]-1H-pyrrole-2,5-dione,

1-(3-{2-[2-(3-Hydrazino-3-oxopropoxy)ethoxy]ethylamino}-3-oxopropyl)-1H-pyrrole-2,5-dione, or

1-[3-(2-{2-[2-(2-Aminoethoxy)ethoxy]ethoxy}ethylamino)-3-oxopropyl]-1H-pyrrole-2,5-dione;

Z is a biocompatible polymer having a molecular weight of from about 0.8 MDa to about 3 MDa, wherein the biocompatible polymer is hyaluronic acid; and

subscript n is an integer from 10 to 1000.

2 . The conjugate of claim 1 , wherein the peptide is an inhibitor of angiogenesis.

3 . The conjugate of claim 2 , wherein the peptide is an antibody specific for VEGF- or a DARPin specific for VEGF.

4 . The conjugate of claim 2 , wherein the peptide inhibits VEGF-A, VEGF-B, VEGF-C, VEGF-D, Ang-1, Ang-2, PDGF, or PlGF.

5 . The conjugate of claim 2 , wherein the peptide is a monoclonal IgG antibody, an IgG antibody fragment, a single-chain variable region antibody, a single-domain heavy chain antibody, or a DARPin.

6 . The conjugate of claim 1 , wherein the peptide modulates the activity of immune cell function.

7 . The conjugate of claim 6 , wherein the peptide inhibits tumor necrosis factor-α.

8 . The conjugate of claim 6 , wherein the peptide is a monoclonal IgG antibody, an IgG antibody fragment, a single-chain variable region antibody, a single-domain heavy chain antibody, or a DARPin.

9 . The conjugate of claim 6 , wherein the peptide has an amino acid sequence selected from the group consisting of SEQ ID NO:1, SEQ ID NO:2, SEQ ID NO:6, SEQ ID NO:7, SEQ ID NO:8, SEQ ID NO:9, and SEQ ID NO:10.

10 . The conjugate of claim 6 , wherein the peptide has a sequence:

(SEQ ID NO: 1)

QVQLQESGGGLVQPGGSLRLSCAASGRTFSDHSGYTYTIGWFRQAPGKER

EFVARIYWSSGNTYYADSVKGRFAISRDIAKNTVDLTMNNLEPEDTAVYY

CAARDGIPTSRSVESYNYWGQGTQVTVSS.

11 . The conjugate of claim 1 , wherein the biocompatible polymer has a molecular weight of about 0.9 MDa.

12 . The conjugate of claim 1 , wherein the biocompatible polymer has a molecular weight of about 2 MDa.

13 . The conjugate of claim 1 , wherein subscript n is an integer of from 10 to 400.

14 . The conjugate of claim 1 , wherein subscript n is an integer of from 10 to 100.

15 . The conjugate of claim 1 , wherein subscript n is an integer of from 50 to 100.

16 . A pharmaceutical composition comprising the conjugate of claim 1 , and a pharmaceutically acceptable carrier.

17 . The conjugate of claim 1 , wherein the hydrophilic linker corresponds to 1-(3-{2-[2-(3-Hydrazino-3-oxopropoxy)ethoxy]ethylamino}-3-oxopropyl)-1H-pyrrole-2,5-dione.

18 . The conjugate of claim 1 , wherein the hydrophilic linker is

Assignments (1)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded May 3, 2022
From: JACKSON, WESLEY M.; TWITE, AMY A.; BRIER, LIVIA WILZ
To: VALITOR, INC.
Reel/Frame 059799/0518 →
Continuity (3)
Provisional Application 62869233 · Jul 1, 2019
Provisional Application 62898967 · Sep 11, 2019
Related Publication 20220251185A1 · Aug 11, 2022
References Cited (118)
US 5162218A · Schultz · 1992 [cited by applicant]
US 6781030B1 · Baguisi et al. · 2004 [cited by applicant]
US 6964859B2 · Rajbhandary et al. · 2005 [cited by applicant]
US 7122636B1 · Hsei et al. · 2006 [cited by applicant]
US 8591885B2 · Chang et al. · 2013 [cited by applicant]
US 8759322B2 · Akiyoshi et al. · 2014 [cited by applicant]
US 9034624B2 · D'Este et al. · 2015 [cited by applicant]
US 9221893B2 · Hahn et al. · 2015 [cited by applicant]
US 9428561B2 · Healy et al. · 2016 [cited by applicant]
US 9925237B2 · Healy et al. · 2018 [cited by applicant]
US 10350267B2 · Healy et al. · 2019 [cited by applicant]
US 10485882B2 · Santamaria · 2019 [cited by applicant]
US 10653621B2 · Wu et al. · 2020 [cited by applicant]
US 10765759B2 · Healy et al. · 2020 [cited by applicant]
US 10787490B2 · Bhandari et al. · 2020 [cited by applicant]
US 10899828B2 · Koenig et al. · 2021 [cited by applicant]
US 10941182B2 · Holder et al. · 2021 [cited by applicant]
US 11111291B2 · Famili et al. · 2021 [cited by applicant]
US 11229709B2 · Hammond et al. · 2022 [cited by applicant]
US 11291707B2 · Healy et al. · 2022 [cited by applicant]
US 11553879B2 · Bremer · 2023 [cited by applicant]
US 11723982B2 · Healy et al. · 2023 [cited by applicant]
US 20030003048A1 · Li et al. · 2003 [cited by applicant]
US 20030236214A1 · Wolff et al. · 2003 [cited by applicant]
US 20040038876A1 · Pepinsky et al. · 2004 [cited by applicant]
US 20040116348A1 · Chau et al. · 2004 [cited by applicant]
US 20050025752A1 · Kutryk et al. · 2005 [cited by applicant]
US 20050260651A1 · Calias et al. · 2005 [cited by applicant]
US 20050282747A1 · Clark et al. · 2005 [cited by applicant]
US 20060034833A1 · Beirnaert · 2006 [cited by applicant]
US 20060034846A1 · Ezban et al. · 2006 [cited by applicant]
US 20060094643A1 · Svirkin et al. · 2006 [cited by applicant]
US 20060171920A1 · Shechter et al. · 2006 [cited by applicant]
US 20060246523A1 · Bieniarz et al. · 2006 [cited by applicant]
US 20070026518A1 · Healy et al. · 2007 [cited by applicant]
US 20080113935A1 · Yedgar et al. · 2008 [cited by applicant]
US 20080268051A1 · Hughes et al. · 2008 [cited by applicant]
US 20100104585A1 · Kiessling et al. · 2010 [cited by applicant]
US 20100210509A1 · Oh et al. · 2010 [cited by applicant]
US 20110046038A1 · Healy et al. · 2011 [cited by applicant]
US 20110053865A1 · Sauders · 2011 [cited by applicant]
US 20110111035A1 · Washburn et al. · 2011 [cited by applicant]
US 20120014975A1 · Hegen et al. · 2012 [cited by applicant]
US 20120282211A1 · Washburn et al. · 2012 [cited by applicant]
US 20140038892A1 · Yayon et al. · 2014 [cited by applicant]
US 20150030626A1 · Pietersz et al. · 2015 [cited by applicant]
US 20150110782A1 · Silence et al. · 2015 [cited by applicant]
US 20160158270A1 · Singh et al. · 2016 [cited by applicant]
US 20170112899A1 · Healy et al. · 2017 [cited by applicant]
US 20180293360A1 · Kelley et al. · 2018 [cited by applicant]
US 20180318431A1 · Healy et al. · 2018 [cited by applicant]
US 20180325999A1 · Healy et al. · 2018 [cited by applicant]
US 20190142953A1 · Edelman et al. · 2019 [cited by applicant]
US 20190216945A1 · Yang et al. · 2019 [cited by applicant]
US 20200085910A1 · Healy et al. · 2020 [cited by applicant]
US 20200095340A1 · Wesche et al. · 2020 [cited by applicant]
US 20200384130A1 · Detappe et al. · 2020 [cited by applicant]
US 20210046181A1 · Jackson et al. · 2021 [cited by applicant]
US 20210113655A1 · Healy et al. · 2021 [cited by applicant]
US 20210113702A1 · Healy et al. · 2021 [cited by applicant]
US 20220265763A1 · Healy et al. · 2022 [cited by applicant]
US 20240148882A1 · Healy et al. · 2024 [cited by applicant]
WO 0045848A1 · 2000 [cited by applicant]
WO 03031581A1 · 2003 [cited by applicant]
WO 2005054860A1 · 2005 [cited by applicant]
WO 2005110489A2 · 2005 [cited by applicant]
WO 2009120893A2 · 2009 [cited by applicant]
WO 2011039370 · 2011 [cited by applicant]
WO 2012028716 · 2012 [cited by applicant]
WO WO2016147031 · 2016 [cited by examiner]
WO 2017100470A1 · 2017 [cited by applicant]
WO WO2017196986 · 2017 [cited by examiner]
WO 2019173777A1 · 2019 [cited by applicant]
WO 2023183786 · 2023 [cited by applicant]
WO 2023201335A2 · 2023 [cited by applicant]
WO 2023201336A2 · 2023 [cited by applicant]
WO 2023201337 · 2023 [cited by applicant]
Ahmad, R., El Mabrouk, M., Sylvester, J., & Zafarullah, M. (2009). Human osteoarthritic chondrocytes are impaired in matrix metalloproteinase-13 inhibition by IFN-γ due to reduced IFN-γ receptor levels. [cited by applicant]
Jha et al., “Perlecan domain I-conjugated, hyaluronic acid-based hydrogel particles for enhanced chondrogenic differentiation via BMP-2 release”, Biomaterials, 2009, 30(36), 6964-6975. [cited by applicant]
Magalhães et al. “Methods of Endotoxin Removal from Biological Preparations: a Review.” J. Pharm. Pharmaceut. Sci., 2007, pp. 388-404. [cited by applicant]
Schneier et al. “Current technologies to endotoxin detection and removal for biopharmaceutical purification,” Biotechnology and Bioengineering, Apr. 25, 2020, 117(8), pp. 2588-2609. [cited by applicant]
Sweander et al., “Filtration Removal of Endotoxin (Pyrogens) in Solution in Different States of Aggregation,” Applied and Environmental Microbiology, Oct. 1977, 34(4), pp. 382-385. [cited by applicant]
Washburn et al. Polymer-conjuugated inhibitors of tumor necrosis factor-a for local control of inflammation., Biomatter, Jul. 10, 2013, vol. 3, No. 3. Article e25597, p. 1-7, Fig 2A. [cited by applicant]
Westacott et al., “Tumor necrosis factor alpha can contribute to focal loss of cartilage in osteoarthritis,” [cited by applicant]
International Search Report & Written Opinion of PCT/US2023/64741 mailed Aug. 28, 2023, 11 pages. [cited by applicant]
International Search Report & Written Opinion of PCT/US2023/65779 mailed Oct. 6, 2023, 12 pages. [cited by applicant]
International Search Report and Written Opinion for Application No. PCT/US2020/040430, Mailed on Oct. 1, 2020, 10 pages. [cited by applicant]
International Search Report and Written Opinion for International PCT Application No. PCT/US2019/021460, mailed on May 24, 2019, 11 pages. [cited by applicant]
International Search Report and Written Opinion received for PCT Application No. PCT/US2009/038446, mailed on Dec. 14, 2009, 10 pages. [cited by applicant]
International Search Report and Written Opinion received for PCT Application No. PCT/US2016/065653, mailed on Feb. 24, 2017, 10 pages. [cited by applicant]
Al-Muhammed et al. (1996) “In-Vivo Studies on Dexamethasone Sodium Phosphate Liposomes”, Journal of Microencapsulation, 13(3):293-306. [cited by applicant]
Altiok et al. (Jul. 2016) “Multivalent Hyaluronic Acid Bioconjugates Improve sFlt-1 Activity in Vitro”, Biomaterials, 93:95-105(27 pages). [cited by applicant]
Altiok Eda I. (Oct. 2015) “Improving Anti-VEGF Drugs in the Vitreous”, Dissertation, UC Berkeley, 94 pages. [cited by applicant]
Aoyagi et al. (1999) “Peptide Drug Carrier: Studies on Incorporation of Vasopressin into Nano-associates Comprising Poly(ethylene glycol)-poly (L-aspartic acid) Block Copolymer”, Colloids and Surfaces B: Biointerfaces, … [cited by applicant]
Arpicco et al. (2002) “Novel Poly(ethylene glycol) Derivatives for Preparation of Ribosome-Inactivating Protein Conjugates”, Bioconjugate Chemistry, 13(4):757-765. [cited by applicant]
Cairo et al. (Feb. 2, 2002) “Control of Multivalent Interactions by Binding Epitope Density”, Journal of the American Chemical Society, 124(8):1615-1619. [cited by applicant]
Chen et al. (1997) “Mitogenic Activities of Water-Soluble and-Insoluble Insulin Conjugates”, Bioconjugate Chemistry, 8(2):106-110. [cited by applicant]
Chonn et al. (1995) “Recent Advances in Liposomal Drug-Delivery Systems”, Current Opinion in Biotechnology, 6(6):698-708. [cited by applicant]
Eyles et al. (Jul. 1997) “Oral Delivery and Fate of Poly(Lactic Acid) Microsphere-Encapsulated Interferon in Rats”, Journal of Pharmacy and Pharmacology, 49(7):669-674. [cited by applicant]
Gao et al. (Jun. 1995) “Controlled Release of a Contraceptive Steroid from Biodegradable and Injectable Gel Formulations: In Vitro Evaluation”, Pharmaceutical Research, 12(6):857-863. [cited by applicant]
Gestwicki et al. (2002) “Influencing Receptor-Ligand Binding Mechanisms with Multivalent Ligand Architecture”, Journal of the American Chemical Society, 124(50):14922-14933. [cited by applicant]
Glass et al. (Jun. 1996) “Characterization of a Hyaluronic Acid-Arg-Gly-Asp Peptide Cell Attachment Matrix”, Biomaterials, 17(11):1101-1108. [cited by applicant]
Itoda et al. (2003) “Evaluation of the Molecular Recognition of Peptide-Conjugated Polymer”, Analytical Sciences, 19(1):185-187. [cited by applicant]
Line et al. (Sep. 2005) “Targeting Tumor Angiogenesis: Comparison of Peptide and Polymer-Peptide Conjugates”, Journal of Nuclear Medicine, 46(9):1552-1560. [cited by applicant]
Mammen et al. (1998) “Polyvalent Interactions in Biological Systems: Implications for Design and Use of Multivalent Ligands and Inhibitors”, Angewandte Chemie International Edition, 37(20):2754-2794. [cited by applicant]
Merrifield Robert B. (Jul. 20, 1963) “Solid Phase Peptide Synthesis. I. The Synthesis of a Tetrapeptide”, Journal of the American Chemical Society, 85(14):2149-2154. [cited by applicant]
Minto et al. (Apr. 1, 1997) “Pharmacokinetics and Pharmacodynamics of Nandrolone Esters in Oil Vehicle: Effects of Ester, Injection Site and Injection Volume”, The Journal of Pharmacology and Experimental Therapeutics, … [cited by applicant]
Mitra et al. (2006) “Polymer-Peptide Conjugates for Angiogenesis Targeted Tumor Radiotherapy”, Nuclear Medicine and Biology, 33:43-52. [cited by applicant]
Morgen et al. (2013) “Nanoparticles for Improved Local Retention after Intra-Articular Injection into the Knee Joint”, Pharmaceutical Research, 30:257-268. [cited by applicant]
Ostro et al. (1989) “Use of Liposomes as Injectable-Drug Delivery Systems”, American Journal of Health-System Pharmacy, 46(8):1576-1587. [cited by applicant]
Payne et al. (Apr. 2012) “Expression of Recombinant Canine sFlt1 as an Experimental Anti-angiogenic Agent”, The FASEB Journal, 26(1):2 pages. [cited by applicant]
Presle et al. (1999) “Cartilage Protection by Nitric Oxide Synthase Inhibitors After Intraarticular Injection of Interleukin-1 Beta in Rats”, Arthritis & Rheumatology, 42(10):2094-2102. [cited by applicant]
Rao K. Paduranga, (1995) “Recent Developments of Collagen-Based Materials for Medical Applications and Drug Delivery Systems”, Journal of Biomaterials Science, Polymer Edition, 7(7):623-645. [cited by applicant]
Shahangian et al. (Mar. 2015) “A Conformation-Based Phage-Display Panning to Screen Neutralizing Anti-VEGF VHHs with VEGFR2 Mimicry Behavior”, International Journal of Biological Macromolecules, 77:222-234. [cited by applicant]
Smith et al. (2003) “Conjugation of Arginine—Glycine—Aspartic Acid Peptides to Thermoreversible N-Isopropylacrylamide Polymers”, Journal of Polymer Science: Part A: Polymer Chemistry, 41(24):3989-4000. [cited by applicant]
Urech et al. (2010) “Anti-inflammatory and Cartilage-protecting Effects of an Intra-articularly Injected Anti-TNFα Single-chain Fv Antibody (ESBA 105) Designed for Local Therapeutic Use”, Annals of the Rheumatic Disease… [cited by applicant]
Wall et al. (Apr. 2008) “Multivalency of Sonic Hedgehog Conjugated to Linear Polymer Chains Modulates Protein Potency”, Bioconjugate Chemistry, 19(4):806-812. [cited by applicant]
Yu et al. (2015) “Injectable Chemically Crosslinked Hydrogel for the Controlled Release of Bevacizumab in Vitreous: A 6-Month In Vivo Study”, Translational Vision Science and Technology, Article 5, 4(2):11 pages. [cited by applicant]