IP Library › Granted Patent US 12,251,674
Granted Patent B2
US 12,251,674 · App. 16/928,723 · Granted Mar 18, 2025

Substrates, systems, and methods for array synthesis and biomolecular analysis

Inventors: John J. Rajasekaran (Hillsborough, CA); Vasanth Jayaraman (San Mateo, CA); Tianhao Wang (San Mateo, CA); Kang Bei (San Mateo, CA); Hari Krishnan Krishnamurthy (San Mateo, CA); Punitha Vedantham (San Carlos, CA)
Assignee: Vibrant Holdings, LLC
B01J19/0046C40B50/18G01N33/6842B01J2219/00596B01J2219/00637B01J2219/00711B01J2219/00725
View Patent ↗
Loading inventors, assignments & file history…
Monitor This Case
Get email alerts when status or documents change.
Order Certified Copies
Most orders are placed with the USPTO same day — all within 24 business hours.
Order via The Patent Place →
Pre-filled with this patent's details
Quick Facts
Patent No.
US 12,251,674
App. No.
16/928,723
Granted
Mar 18, 2025
Kind
B2
Abstract

Disclosed herein are formulations, substrates, and arrays. In certain embodiments, substrates and arrays comprise a porous layer for synthesis and attachment of polymers or biomolecules. Also disclosed herein are methods for manufacturing and using the formulations, substrates, and arrays, including porous arrays. Also disclosed herein are formulations and methods for one-step coupling, e.g., for synthesis of peptides in an N→C orientation. In some embodiments, disclosed herein are formulations and methods for high efficiency coupling of biomolecules to a substrate.

Claims (18)

1. A method of attaching a coupling molecule to a substrate, comprising:

obtaining a substrate comprising a plurality of carboxylic acid groups for linking to a coupling molecule;

contacting said substrate with a carboxylic acid activating compound formulation comprising a carbodiimide precursor selected from the group consisting of: 1-(3-(diethylamino)-propyl)-4-(2-methoxyphenyl)-1,4-dihydro-5H-tetrazole-5-thione, 4,5-dihydro-4-(hydroxymethyl)-1-phenyl-1H-tetrazole-5-thione, 1-(3-(dimethylamino) propyl)-4-ethyl-1,4-dihydro-5H-tetrazole-5-thione, 1,4-Bis (2,2-dimethyl-1,3-dioxolan-4-ylmethyl)-1,4-dihydro-5H-tetrazole-5-thione, 4-cyclohexyl-1H-tetrazole-5(4H)-thione, and 1-phenyl-4-(piperidinomethyl)-tetrazole-5(4H)-thione, wherein said carbodiimide precursor converts to a carbodiimide upon exposure to electromagnetic radiation at a defined wavelength;

selectively exposing said carboxylic acid activating compound formulation to the electromagnetic radiation, thereby generating said carbodiimide and activating the carboxylic acid groups to form carbonyl groups on said substrate at a selectively exposed area;

contacting said substrate with a coupling formulation comprising a coupling molecule and a solvent;

coupling the coupling molecule to at least one of said plurality of carbonyl groups at said selectively exposed area.

2. The method of claim 1 , wherein said defined wavelength is 248 nm or 193 nm.

3. The method of claim 1 , wherein said carboxylic acid activating compound formulation or said coupling formulation further comprises a polymer.

4. The method of claim 3 , wherein said polymer is poly (methyl methacrylate), polyvinyl pyrrolidone, or polyvinyl alcohol.

5. The method of claim 1 , wherein said carboxylic acid activating compound formulation and said coupling formulation are present on the substrate when said substrate is exposed to said electromagnetic radiation.

6. The method of claim 1 , wherein said coupling step is performed multiple times at different selectively exposed areas on said substrate.

7. The method of claim 1 , wherein said coupling step has a coupling efficiency of at least 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, 98.5%, or 99%.

8. The method of claim 1 , wherein said coupling molecule is an amino acid, a protein, or a polypeptide.

9. The method of claim 1 , wherein said coupling molecule comprises a protected amine group.

10. The method of claim 9 , wherein said amine group is protected by Fmoc.

11. The method of claim 1 , further comprising repeating said method to produce a desired polypeptide at said at least one carbonyl group.

12. The method of claim 1 , wherein said substrate comprises a porous layer, and optionally wherein said substrate comprises a porous layer comprising a plurality of attachment sites extending in multiple dimensions from the surface of said porous layer within and around said porous layer.

13. The method of claim 1 , wherein said substrate comprises a planar layer comprising a metal and having an upper surface and a lower surface; and a plurality of pillars operatively coupled to the layer in positionally-defined locations, wherein each pillar has a planar surface extended from the layer, wherein the distance between the surface of each pillar and the upper surface of the layer is between 1,000-5,000 angstroms, wherein the surface of each pillar is parallel to the upper surface of the layer, and wherein the plurality of pillars are present at a density of greater than 10,000/cm 2 , and wherein the attachment site is coupled to the upper surface of the pillar.

Assignments (2)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Sep 1, 2021
From: RAJASEKARAN, JOHN J.; JAYARAMAN, VASANTH; WANG, TIANHAO; BEI, KANG; KRISHNAMURTHY, HARI KRISHNAN
To: VIBRANT HOLDINGS, LLC
Reel/Frame 057353/0364 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Sep 1, 2021
From: VEDANTHAM, PUNITHA
To: VIBRANT HOLDINGS, LLC
Reel/Frame 057353/0397 →
Continuity (11)
Continuation 16287968 · Feb 27, 2019
Continuation 14442389
Continuation In Part PCTUS2013062773 · Sep 30, 2013
Continuation In Part PCTUS2013025190 · Feb 7, 2013
Provisional Application 61726515 · Nov 14, 2012
Provisional Application 61732221 · Nov 30, 2012
Provisional Application 61765584 · Feb 15, 2013
Provisional Application 61805884 · Mar 27, 2013
Provisional Application 61866512 · Aug 15, 2013
Provisional Application 61761347 · Feb 6, 2013
Related Publication 20200406220A1 · Dec 31, 2020
References Cited (335)
US 5069996A · Rogler · 1991 [cited by applicant]
US 5143854A · Pirrung et al. · 1992 [cited by applicant]
US 5240811A · Taylor et al. · 1993 [cited by applicant]
US 5310687A · Bard et al. · 1994 [cited by applicant]
US 5405766A · Kallury et al. · 1995 [cited by applicant]
US 5866434A · Massey et al. · 1999 [cited by applicant]
US 5919523A · Sundberg et al. · 1999 [cited by applicant]
US 5945286A · Krihak et al. · 1999 [cited by applicant]
US 6017696A · Heller · 2000 [cited by applicant]
US 6040138A · Lockhart et al. · 2000 [cited by applicant]
US 6083697A · Beecher et al. · 2000 [cited by applicant]
US 6140045A · Wohlstadter et al. · 2000 [cited by applicant]
US 6319726B1 · Schuppan et al. · 2001 [cited by applicant]
US 6329209B1 · Wagner et al. · 2001 [cited by applicant]
US 6506558B1 · Fodor et al. · 2003 [cited by applicant]
US 6521181B1 · Northrup et al. · 2003 [cited by applicant]
US 6720157B2 · Indermuhle et al. · 2004 [cited by applicant]
US 6824866B1 · Glazer et al. · 2004 [cited by applicant]
US 6943034B1 · Winkler et al. · 2005 [cited by applicant]
US 7160687B1 · Kapur et al. · 2007 [cited by applicant]
US 7510841B2 · Stuelpnagel et al. · 2009 [cited by applicant]
US 7544638B2 · Gao et al. · 2009 [cited by applicant]
US 8128908B2 · Santra et al. · 2012 [cited by applicant]
US 8748181B2 · Kuo et al. · 2014 [cited by applicant]
US 9216399B2 · Rajasekaran et al. · 2015 [cited by applicant]
US 9417236B2 · Rajasekaran et al. · 2016 [cited by applicant]
US 9499578B2 · Rajasekaran et al. · 2016 [cited by applicant]
US 10006909B2 · Rajasekaran et al. · 2018 [cited by applicant]
US 10040818B2 · Jayaraman · 2018 [cited by applicant]
US 10175234B2 · Rajasekaran et al. · 2019 [cited by applicant]
US 10286376B2 · Rajasekaran et al. · 2019 [cited by applicant]
US 10486129B2 · Rajasekaran et al. · 2019 [cited by applicant]
US 10746732B2 · Rajasekaran et al. · 2020 [cited by applicant]
US 10799845B2 · Rajasekaran et al. · 2020 [cited by applicant]
US 10816553B2 · Rajasekaran et al. · 2020 [cited by applicant]
US 11565231B2 · Rajasekaran et al. · 2023 [cited by applicant]
US 11674956B2 · Rajasekaran et al. · 2023 [cited by applicant]
US 11815512B2 · Rajasekaran et al. · 2023 [cited by applicant]
US 20020076834A1 · Detlef et al. · 2002 [cited by applicant]
US 20020086319A1 · Ellson et al. · 2002 [cited by applicant]
US 20030060917A1 · Bun et al. · 2003 [cited by applicant]
US 20030068446A1 · Mirkin et al. · 2003 [cited by applicant]
US 20030082294A1 · Bruhn et al. · 2003 [cited by applicant]
US 20030124029A1 · Webb et al. · 2003 [cited by applicant]
US 20030148401A1 · Agrawal et al. · 2003 [cited by applicant]
US 20030194715A1 · Li et al. · 2003 [cited by applicant]
US 20030228605A1 · Sloostra et al. · 2003 [cited by applicant]
US 20030230550A1 · Chang · 2003 [cited by applicant]
US 20040038388A1 · Yamamoto et al. · 2004 [cited by applicant]
US 20040185483A1 · Stuelpnagel et al. · 2004 [cited by applicant]
US 20050042771A1 · Koster et al. · 2005 [cited by applicant]
US 20050221351A1 · Ryu · 2005 [cited by applicant]
US 20050240811A1 · Safford et al. · 2005 [cited by applicant]
US 20050244863A1 · Mir · 2005 [cited by applicant]
US 20050260611A1 · Wang et al. · 2005 [cited by applicant]
US 20050260770A1 · Cohen et al. · 2005 [cited by applicant]
US 20060088863A1 · Yamamoto et al. · 2006 [cited by applicant]
US 20060172340A1 · Wohlstadter et al. · 2006 [cited by applicant]
US 20070059763A1 · Okano et al. · 2007 [cited by applicant]
US 20070122841A1 · Rajasekaran et al. · 2007 [cited by applicant]
US 20070122842A1 · Rajasekaran et al. · 2007 [cited by applicant]
US 20070154946A1 · Rajasekaran et al. · 2007 [cited by applicant]
US 20070207487A1 · Emig et al. · 2007 [cited by applicant]
US 20070231794A1 · Dill et al. · 2007 [cited by applicant]
US 20080108149A1 · Sundararajan et al. · 2008 [cited by applicant]
US 20080305964A1 · Bar-Ziv et al. · 2008 [cited by applicant]
US 20090311727A1 · Watkins et al. · 2009 [cited by applicant]
US 20090325816A1 · Mirkin et al. · 2009 [cited by applicant]
US 20100028559A1 · Yan et al. · 2010 [cited by applicant]
US 20100093554A1 · Chu · 2010 [cited by applicant]
US 20100120630A1 · Huang et al. · 2010 [cited by applicant]
US 20100240555A1 · Sundararajan et al. · 2010 [cited by applicant]
US 20100245057A1 · Chamarti et al. · 2010 [cited by applicant]
US 20100291547A1 · Chen et al. · 2010 [cited by applicant]
US 20110097762A1 · Gao et al. · 2011 [cited by applicant]
US 20110151139A1 · Kim et al. · 2011 [cited by applicant]
US 20110190210A1 · Adini et al. · 2011 [cited by applicant]
US 20110262348A1 · Movahedi et al. · 2011 [cited by applicant]
US 20110281766A1 · Cooper · 2011 [cited by applicant]
US 20110293644A1 · Anderson et al. · 2011 [cited by applicant]
US 20110303027A1 · Shirazi et al. · 2011 [cited by applicant]
US 20120106280A1 · Liu · 2012 [cited by applicant]
US 20120156280A1 · Dow et al. · 2012 [cited by applicant]
US 20120172309A1 · Dal Farra et al. · 2012 [cited by applicant]
US 20120183981A1 · Norman et al. · 2012 [cited by applicant]
US 20120245057A1 · Albert et al. · 2012 [cited by applicant]
US 20130115558A1 · Kim · 2013 [cited by applicant]
US 20140072963A1 · Qin · 2014 [cited by applicant]
US 20140349888A1 · Rajasekaran et al. · 2014 [cited by applicant]
US 20150260712A1 · Rajasekaran et al. · 2015 [cited by applicant]
US 20160003816A1 · Rajasekaran et al. · 2016 [cited by applicant]
US 20160067667A1 · Rajasekaran et al. · 2016 [cited by applicant]
US 20160144368A1 · Isami et al. · 2016 [cited by applicant]
US 20160193608A1 · Isami et al. · 2016 [cited by applicant]
US 20160288080A1 · Rajasekaran et al. · 2016 [cited by applicant]
US 20160327552A1 · Rajasekaran et al. · 2016 [cited by applicant]
US 20170168047A1 · Aghvanyan et al. · 2017 [cited by applicant]
US 20170192007A1 · Rajasekaran et al. · 2017 [cited by applicant]
US 20180106795A1 · Rajasekaran et al. · 2018 [cited by applicant]
US 20190018006A1 · Rajasekaran et al. · 2019 [cited by applicant]
US 20190366291A1 · Rajasekaran et al. · 2019 [cited by applicant]
US 20210215686A1 · Rajasekaran et al. · 2021 [cited by applicant]
US 20220365080A1 · Rajasekaran et al. · 2022 [cited by applicant]
CN 103675291A · 2014 [cited by applicant]
EP 2812344A1 · 2014 [cited by applicant]
EP 2920272B1 · 2019 [cited by applicant]
EP 2901159B1 · 2020 [cited by applicant]
EP 2956771B1 · 2020 [cited by applicant]
EP 3690442B1 · 2021 [cited by applicant]
EP 3702782B1 · 2022 [cited by applicant]
GB 1066823A · 1967 [cited by applicant]
JP S59178729A · 1984 [cited by applicant]
JP S63246821A · 1988 [cited by applicant]
JP H02146720A · 1990 [cited by applicant]
JP H05294995A · 1993 [cited by applicant]
JP H06500308A · 1994 [cited by applicant]
JP H08166387A · 1996 [cited by applicant]
JP H10318928A · 1998 [cited by applicant]
JP H11026392A · 1999 [cited by applicant]
JP 2001172259A · 2001 [cited by applicant]
JP 2002500362A · 2002 [cited by applicant]
JP 2002502698A · 2002 [cited by applicant]
JP 2002151403A · 2002 [cited by applicant]
JP 2002190446A · 2002 [cited by applicant]
JP 2002520618A · 2002 [cited by applicant]
JP 2002525577A · 2002 [cited by applicant]
JP 2003057236A · 2003 [cited by applicant]
JP 2003517149A · 2003 [cited by applicant]
JP 2003523348A · 2003 [cited by applicant]
JP 2003524193A · 2003 [cited by applicant]
JP 2003307518A · 2003 [cited by applicant]
JP 2003342354A · 2003 [cited by applicant]
JP 2004512514A · 2004 [cited by applicant]
JP 2004264289A · 2004 [cited by applicant]
JP 2005512032A · 2005 [cited by applicant]
JP 2005513999A · 2005 [cited by applicant]
JP 2005521032A · 2005 [cited by applicant]
JP 2005264156A · 2005 [cited by applicant]
JP 2005528582A · 2005 [cited by applicant]
JP 2005530983A · 2005 [cited by applicant]
JP 2006126204A · 2006 [cited by applicant]
JP 2007504462A · 2007 [cited by applicant]
JP 2007183258A · 2007 [cited by applicant]
JP 2007536512A · 2007 [cited by applicant]
JP 2008508856A · 2008 [cited by applicant]
JP 2008170449A · 2008 [cited by applicant]
JP 2008157952A · 2008 [cited by applicant]
JP 2008197107A · 2008 [cited by applicant]
JP 2009510786A · 2009 [cited by applicant]
JP 2009075131A · 2009 [cited by applicant]
JP 2009534200A · 2009 [cited by applicant]
JP 2010507099A · 2010 [cited by applicant]
JP 2010215816A · 2010 [cited by applicant]
JP 2010286481A · 2010 [cited by applicant]
JP 2011017711A · 2011 [cited by applicant]
JP 2011027632A · 2011 [cited by applicant]
JP 2011519168A · 2011 [cited by applicant]
JP 2011177998A · 2011 [cited by applicant]
JP 2011234723A · 2011 [cited by applicant]
JP 2012163491A · 2012 [cited by applicant]
JP 2012518294A · 2012 [cited by applicant]
JP 6275152B2 · 2018 [cited by applicant]
WO WO199428075A1 · 1994 [cited by applicant]
WO 1995026505A1 · 1995 [cited by applicant]
WO WO199803872A2 · 1998 [cited by applicant]
WO WO199812539A1 · 1998 [cited by applicant]
WO WO199941007A2 · 1999 [cited by applicant]
WO WO200016089A2 · 2000 [cited by applicant]
WO 200056927A2 · 2000 [cited by applicant]
WO WO200143870A2 · 2001 [cited by applicant]
WO 2002004951A1 · 2002 [cited by applicant]
WO 0242775A2 · 2002 [cited by applicant]
WO WO2003001889A2 · 2003 [cited by applicant]
WO 03022421A2 · 2003 [cited by applicant]
WO WO2003023360A2 · 2003 [cited by applicant]
WO WO2003038033A2 · 2003 [cited by applicant]
WO WO2003104273A2 · 2003 [cited by applicant]
WO WO2004027093A1 · 2004 [cited by applicant]
WO WO2005014696A1 · 2005 [cited by applicant]
WO 2005105129A2 · 2005 [cited by applicant]
WO WO2007038647A2 · 2007 [cited by applicant]
WO WO2007078868A1 · 2007 [cited by applicant]
WO WO2008097370A2 · 2008 [cited by applicant]
WO WO2008118167A1 · 2008 [cited by applicant]
WO WO2008151146A2 · 2008 [cited by applicant]
WO WO2009132321A1 · 2009 [cited by applicant]
WO WO2010060155A1 · 2010 [cited by applicant]
WO WO2010085763A1 · 2010 [cited by applicant]
WO WO2010096593A2 · 2010 [cited by applicant]
WO 2011038138A1 · 2011 [cited by applicant]
WO WO2011027048A1 · 2011 [cited by applicant]
WO WO2011034620A2 · 2011 [cited by applicant]
WO WO2011058136A1 · 2011 [cited by applicant]
WO 2011115580A1 · 2011 [cited by applicant]
WO WO2012122929A1 · 2012 [cited by applicant]
WO WO2012122959A1 · 2012 [cited by applicant]
WO WO2012154594A1 · 2012 [cited by applicant]
WO WO2012174479A1 · 2012 [cited by applicant]
WO WO2013119845A1 · 2013 [cited by applicant]
WO 2013151135A1 · 2013 [cited by applicant]
WO WO2014052989A2 · 2014 [cited by applicant]
WO WO2014078606A2 · 2014 [cited by applicant]
WO WO2015016315A1 · 2015 [cited by applicant]
WO WO2015029691A1 · 2015 [cited by applicant]
WO 2015127409A1 · 2015 [cited by applicant]
WO 2017117292A1 · 2017 [cited by applicant]
Bartels-Keith et al, “Carbon-13 nuclear magnetic resonance studies of heterocycles bearing carbon-sulfur and carbon-selenium bonds: 1,3,4-thiadiazole, 1,3,4-selenadiazole, and tetrazole derivatives”, J Org Chem, 42(23),… [cited by applicant]
Tochtermann et al., “Zur Reaktion van Bis(5-tetrazolyl)-disulfiden mit Diazoalkanen”, Chem Ber, 111 (2), 1978, 566-573, XP055789943. [cited by applicant]
Alper et al., Azole chemistry. VI.. tetrazolo [5, 4-b][1, 3] thiazinium salts. Journal of Heterocyclic Chemistry 10, No. 4 (1973): 569-574. [cited by applicant]
Awadallah et al., “Gas phase thermolysis of pyrazolines. 5. Electronic structure and gas phase thermolysis of tetrazole derivatives studied by photoelectron spectroscopy.” Journal of heterocyclic chemistry 34, No. 1 (19… [cited by applicant]
Beal et al., “A rapid, inexpensive surface treatment for enhanced functionality of polydimethylsiloxane microfluidic channels.” Biomicrofluidics 6, No. 3 (2012): 036503. [cited by applicant]
Li et al., “RGD peptide-conjugated poly (dimethylsiloxane) promotes adhesion, proliferation, and collagen secretion of human fibroblasts.” Journal of Biomedical Materials Research Part A 79, No. 4 (2006): 989-998. [cited by applicant]
G-Biosciences, “Double-Do, Protein Cross-Linkers: Handbook & Selection Guide”, available online at https://web.archive.org/web/ 20110401025027/http://wolfson.huji.ac.il/purification/PDF/ProteinInteractions/GBIOSC_ProtCr… [cited by applicant]
Hermanson, GT, ed., Bioconjugate Techniques, 2nd Ed., Academic Press, p. 192-195 and 330-333 (2008) (Year: 2008). [cited by applicant]
Tay et al., “Control and signal processing for photoresist processing in microlithography.” In IEEE 2002 28th Annual Conference of the Industrial Electronics Society. IECON 02, vol. 2, pp. 1468-1473. IEEE, 2002. [cited by applicant]
Wallraff et al., “Lithographic imaging techniques for the formation of nanoscopic features,” Chemical Reviews 99, No. 7 (1999) 1801-1822. [cited by applicant]
Merriam-Webster, “Compound”, available online at https://www.merriam-webster.com/dictionary/compound, 11 pages (accessed on Feb. 4, 2021). [cited by applicant]
Balakirev, M et al., “Photochemical Patterning of Biological Molecules Inside a Glass Capillary,” Analytical Chemistry, vol. 77, No. 17, Sep. 1, 2005, pp. 5474-5479. [cited by applicant]
Chen, “Solid-Phase Peptide Synthesis (SPPS) and Applications of Synthetic Peptides,” Proteomics 2010, Jan. 2010, 63 pages [Online] [Retrieved on Sep. 16, 2015] Retrieved from the Internet<URL:http://bas.niu.edu.tw/downl… [cited by applicant]
Gunda, N. et al., “Micro-Spot with Integrated Pillars (MSIP) for Detection of Dengue Virus NS1,” Biomed Microdevices, vol. 15, 2013, pp. 959-971. [cited by applicant]
Piehler, J. et al., “Protein Interactions in Covalently Attached Dextran Layers,” Colloid and Surfaces B: Biointerfaces 13 (1999), pp. 325-336. [cited by applicant]
Thermofisher Scientific, “Molecular Probes™ Handbook: A Guide to Fluorescent Probes and Labeling Technologies,” 11th edition, 2010, pp. 170-188. [cited by applicant]
Wang et al, Microfluidic DNA microarray analysis: A review, 2011, Analytica Chimica Acta, 687, 12-27. [cited by applicant]
U.S. Appl. No. 16/287,968—Office Action, Jan. 6, 2020, 8 pages. [cited by applicant]
CA 2,864,080—Office Action, Nov. 19, 2015, 6 pages. [cited by applicant]
U.S. Appl. No. 14/432,200—Final Office Action, Feb. 8, 2017, 22 pages. [cited by applicant]
Beyer, M. et al., “Combinatorial Synthesis of Peptide Arrays Onto a Microchip,” Science, Dec. 21, 2007, p. 1888, vol. 318, No. 5858. [cited by applicant]
PCT/US2013/070207—Written Opinion, Feb. 12, 2015, 13 pages. [cited by applicant]
U.S. Appl. No. 15/216,267—Office Action, Oct. 26, 2017, 7 pages. [cited by applicant]
PCT/US2016/022299—International Search Report and Written Opinion, Aug. 8, 2016, 19 Pages. [cited by applicant]
PCT/US2016/022299—International Preliminary Report on Patentability, Aug. 3, 2017, 19 pages. [cited by applicant]
Ito, “Development of micro-array biochip using photo-immobilization method.” Kobunshi Ronbunshu 61 (2004): 501-510. [cited by applicant]
U.S. Appl. No. 15/556,482—Office Action, May 16, 2019, 44 pages. [cited by applicant]
U.S. Appl. No. 16/019,449—Notice of Allowance, Oct. 15, 2019, 12 pages. [cited by applicant]
U.S. Appl. No. 15/556,482—Final Office Action, Feb. 24, 2020, 26 pages. [cited by applicant]
U.S. Appl. No. 16/287,968—Office Action, Jan. 6, 2020, 11 pages. [cited by applicant]
PCT/US2013/062773—International Preliminary Report and Patentability, Dec. 18, 2014, 7 pages. [cited by applicant]
Alawode, O. E. et al., “Clean Photodecompositionof 1-Methyl-4-Phenyl-1HTetrazole-5(4H)-Thiones to Carbodiimides Proceeds Via a Biradical,” The Journal of Organic Chemistry, Jan. 7, 2011, pp. 216-222, vol. 76, No. 1. [cited by applicant]
Arimatsu, K., “Development of Highly Sensitive Photoreactive Materials Utilizing Photo Base-Generating Reactions and Base Proliferation Reactions,” Yuki Gosei Kagaku Kyokaishi—Journal of Synthetic Organic Chemistry, Jan… [cited by applicant]
Camarero, J. A., “Review Article: Recent Developments in the Site-Specific Immobilization of Proteins Onto Solid Supports,” Biopolymers (PeptideScience), 2008, pp. 450-458, vol. 90, No. 3. [cited by applicant]
Canadian First Office Action, Canadian Application No. 2,864,080, Nov. 19, 2015, 6 pages. [cited by applicant]
Canadian Office Action, Canadian Application No. 2,864,080, Jul. 10, 2017, 5 pages. [cited by applicant]
Canadian Office Action, Canadian Application No. 2,885,839, Jul. 22, 2016, 4 pages. [cited by applicant]
Canadian Office Action, Canadian Application No. 2,885,839, Sep. 15, 2017, 4 pages. [cited by applicant]
Canadian Office Action, Canadian Application No. 2,891,651, Jun. 2, 2016, 5 pages. [cited by applicant]
Canadian Office Action, Canadian Application No. 2,891,651, Sep. 15, 2017, 4 pages. [cited by applicant]
Canadian Office Action, Canadian Application No. 2,901,029, Dec. 2, 2016, 7 pages. [cited by applicant]
Canadian Office Action, Canadian Application No. 2,901,029, Jul. 5, 2017, 8 pages. [cited by applicant]
Canadian Office Action, Canadian Application No. 2,901,029, May 5, 2016, 7 pages. [cited by applicant]
Canadian Office Action, Canadian Application No. 2,901,029, Mar. 21, 2018, 8 pages. [cited by applicant]
Canadian Office Action, Canadian Application No. 2,901,029, Sep. 8, 2015, 4 pages. [cited by applicant]
Canadian Second Office Action, Canadian Application No. 2,864,080, Dec. 1, 2016, 5 pages. [cited by applicant]
Canadian Second Office Action, Canadian Application No. 2,885,839, Apr. 20, 2017, 4 pages. [cited by applicant]
Canadian Second Office Action, Canadian Application No. 2,891,651, Feb. 10, 2017, 4 pages. [cited by applicant]
Carra, C. et al., “Proton-Coupled Electron Transfer in a Model for Tyrosine Oxidation in Photosystem II,” Journal of the American Chemical Society, 2003, pp. 10429-10436, vol. 125. [cited by applicant]
Compound Summary for: CID 44140583, Tris(2,2′-bipyridine)ruthenium(II) dicholoride, 2009, 2 pages, [Online] [Retrieved on Jun. 29, 2014] Retrieved from the InternetURL:http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi… [cited by applicant]
European Communication Under Rule 164(2)(a) EPC, European Application No. 13798499.3, Jun. 29, 2016, 4 pages. [cited by applicant]
European Examination Report, European Application No. 13747275.9, Sep. 21, 2017, 6 pages. [cited by applicant]
European Examination Report, European Application No. 13783134.3, Jun. 29, 2016, 12 pages. [cited by applicant]
European Examination Report, European Application No. 13783134.3, Apr. 1, 2016, 4 pages. [cited by applicant]
European Examination Report, European Application No. 13783134.3, Dec. 19, 2017, 5 pages. [cited by applicant]
European Examination Report, European Application No. 13798499.3, Sep. 23, 2016, 10 pages. [cited by applicant]
European Examination Report, European Application No. 14751871.6, Jul. 20, 2017, 5 pages. [cited by applicant]
European Extended Search Report, European Application No. 13747275.9, Sep. 25, 2015, 9 pages. [cited by applicant]
European Extended Search Report, European Application No. 14751871.6, Aug. 2, 2016, 6 pages. [cited by applicant]
European Invitation to Pay Additional Search Fees, European Application No. 13783134.3, May 2, 2016, 4 pages. [cited by applicant]
European Second Examination Report, European Application No. 13798499.3, May 23, 2017, 6 pages. [cited by applicant]
Gundagola, A.S.V., Synthesis, Photochemistry, and DNA Photocleavage of Compounds Containing Tetrazolethione Scaffolds, Kansas State University, 2011, 3 pages, [Online] [Retrieved on May 1, 2015] Retrieved from the Inter… [cited by applicant]
Han, S-Y. et al., “Recent Development of Peptide Coupling Reagents in Organic Synthesis,” Tetrahedron, 2004, pp. 2447-2467, vol. 60. [cited by applicant]
Japanese Office Action, Japanese Application No. 2014-556684, Apr. 4, 2016, 5 pages. [cited by applicant]
Japanese Office Action, Japanese Application No. 2015-534809, Aug. 28, 2017, 6 pages. [cited by applicant]
Japanese Office Action, Japanese Application No. 2015-558184, Jan. 25, 2016, 4 pages. [cited by applicant]
Japanese Office Action, Japanese Application No. 2016-126181, May 22, 2017, 10 pages. [cited by applicant]
Japanese Office Action, Japanese Application No. 2016-148004, Jun. 21, 2017, 7 pages. [cited by applicant]
Lim, J-H. et al., “Direct-Write Dip-Pen Nanolithography of Proteins on Modified Silicon Oxide Surfaces,” Angewandte Chemie International Edition, Wile-V CH Verlag GmbH * Co. KGAA, DE, May 25, 2003, pp. 2309-2312, vol. 4… [cited by applicant]
Lin et al., “Synthesis of Water Soluble Photoinitiators of Thioxanthone Derivatives III” Huadong Ligong Daxue Xuebao, Journal of East China University of Science and Technology, 2000, pp. 212-214, 220, vol. 26, No. 2 (w… [cited by applicant]
Meinl, E. et al., “Myelin Basic Protein-Specific T Lymphocyte Repertoire in Multiple Sclerosis, Complexity of the Response and Dominance of Nested Epitopes Due to Recruitment of Multiple T Cell Clones,” The Journal of C… [cited by applicant]
Merrifield, R.B., “Solid Phase Peptide Synthesis. I. The Synthesis of a Tetrapeptide,” J Am. Chem. Soc., Jul. 20, 1963, pp. 2149-2154, vol. 85, No. 14. [cited by applicant]
PCT International Preliminary Report on Patentability for PCT International Application No. PCT/US13/62773, Dec. 18, 2014, 7 pages. [cited by applicant]
PCT International Preliminary Report on Patentability for PCT International Application No. PCT/US14/16737, Feb. 24, 2015, 6 pages. [cited by applicant]
PCT International Preliminary Report on Patentability for PCT International Application No. PCT/US13/25190, Apr. 4, 2014, 18 pages. [cited by applicant]
PCT International Preliminary Report on Patentability, PCT Application No. PCT/US2013/070207, Mar. 30, 2015, 12 pages. [cited by applicant]
PCT International Search Report and Written Opinion, PCT Application No. PCT/US2013/062773, May 28, 2014, 20 pages. [cited by applicant]
PCT International Search Report and Written Opinion, PCT Application No. PCT/US14/16737, Aug. 11, 2014, 17 pages. [cited by applicant]
PCT International Search Report and Written Opinion, PCT Application No. PCT/US13/25190, Jun. 26, 2013, 22 pages. [cited by applicant]
PCT International Search Report and Written Opinion, PCT Application No. PCT/US15/017173, Jun. 3, 2015, 15 pages. [cited by applicant]
PCT International Search Report and Written Opinion, PCT Application No. PCT/US15/49528, Feb. 1, 2016, 18 pages. [cited by applicant]
PCT International Search Report and Written Opinion, PCT Application No. PCT/US2013/070207, Jun. 23, 2014, 19 pages. [cited by applicant]
PCT Invitation to Pay Additional Fees, PCT Application No. PCT/US2013/062773, Mar. 7, 2014, 9 pages. [cited by applicant]
PCT Invitation to Pay Additional Fees, PCT Application No. PCT/US14/16737, May 19, 2014, 2 pages. [cited by applicant]
PCT Invitation to Pay Additional Fees, PCT Application No. PCT/US13/25190, May 1, 2013, 4 pages. [cited by applicant]
PCT Invitation to Pay Additional Fees, PCT Application No. PCT/US15/49528, Nov. 20, 2015, 3 pages. [cited by applicant]
PCT Invitation to Pay Additional Fees, PCT Application No. PCT/US2013/070207, Mar. 14, 2014, 8 pages. [cited by applicant]
PCT Written Opinion of the International Preliminary Examining Authority, PCT Application No. PCT/US2013/070207, Feb. 12, 2015, 13 pages. [cited by applicant]
Pellois, J.P. et al., “Individually Addressable Parallel Peptide Synthesis on Microchips”. Nature Biotechnology, Sep. 2002, pp. 922-926, vol. 20, No. 9. [cited by applicant]
Piehler, J. et al., “Protein Interactions in Covalently Attached Dextran Layers,” Colloids and Surfaces B: Biointerfaces 13, Jul. 1999, pp. 325-336. [cited by applicant]
“Proteomics 2010: Solid-Phase Peptide Synthesis (SPPS) and Applications of Synthetic Peptides,” Jan. 2010, 63 pages [Online] [Retrieved on Sep. 16, 2015] Retrieved from the Internet<URL:http://bas.niu.edu.tw/download.ph… [cited by applicant]
Resch-Genger et al., “Quantum Dots Versus Organic Dyes as Fluorescent Labels,” Nature Methods, Sep. 2008, pp. 763-775, vol. 5, No. 9. [cited by applicant]
Sardesai, N. P., et al., “A Microfluidic Electrochemiluminescent Device for Detecting Cancer Biomarker Proteins,” Anal Bioanal Chem., 2013, pp. 3831-3838; vol. 405, No. 11. [cited by applicant]
Shin, D-S. et al., “Automated Maskless Photolithography System for Peptide Microarray Synthesis on a Chip,” J. Comb. Chem., 2010, pp. 463-471, vol. 12. [cited by applicant]
Sun, X. et al., “Bicyclic Guanidinium Tetraphenylborate: A Photobase Generator and a Photocatalyst for Living Anionic Ring-Opening Polymerization and Cross-Linking of Polymeric Materials Containing Ester and Hydroxy Gro… [cited by applicant]
Suyama, K. et al., “Photobase Generators: Recent Progress and Application Trend in Polymers Systems,” Progress in Polymer Science, Pergamon Press, Oxford, GB, Feb. 2009, pp. 194-209, vol. 34, No. 2. [cited by applicant]
Tapia, V. et al., “Evaluating the Coupling Efficiency of Phosphorylated Amino Acids for SPOT Synthesis,” Journal of Peptide Science, 2008, pp. 1309-1314, vol. 14. [cited by applicant]
Uddayasankar, U., “Towards a Surface Microarray Based Multiplexed Immunoassay on a Digital Microfluidics Platform,” 2010, pp. 1-69, Master of Science Thesis. [Retrieved from the Internet Jun. 29, 2014: <https://cipweb.c… [cited by applicant]
United States Office Action, U.S. Appl. No. 14/432,200, filed Jul. 19, 2017, 17 pages. [cited by applicant]
United States Office Action, U.S. Appl. No. 14/454,554, filed Mar. 16, 2015, 14 pages. [cited by applicant]
United States Office Action, U.S. Appl. No. 14/672,123, filed Dec. 21, 2015, 10 pages. [cited by applicant]
United States Office Action, U.S. Appl. No. 14/768,196, filed Sep. 22, 2017, 18 pages. [cited by applicant]
United States Office Action, U.S. Appl. No. 14/768,196, filed May 30, 2018, 16 pages. [cited by applicant]
United States Office Action, U.S. Appl. No. 14/941,404, filed May 30, 2018, 10 pages. [cited by applicant]
Wagner, J., “Quality Control for Peptide Chop Array Production,” Ph.D. Thesis, University of Heidelberg, Germany, Oct. 2011, 140 pages. [cited by applicant]
Wei, H. et al., “Electrochemiluminescence of tris(2,2′-bipyridyl) ruthenium and Its Applications in Bioanalysis: A Review,” Luminescence, Mar.-Apr. 2011, pp. 77-85, vol. 26, Issue 2. [cited by applicant]
Young, et al., Peptide Research, Jul. 1990, pp. 194-200, vol. 3, No. 4. [cited by applicant]
Yuan, L., et al., “Integrated Tyramide and Polymerization-Assisted Signal Amplification for a Highly-Sensitive Immunoassay,” Anal. Chem., 2012, p. 10737-10744, vol. 84, No. 24. [cited by applicant]
Zhao, Y. et al., “A Fluorescent Amino Acid Probe to Monitor Efficiency of Peptide Conjugation to Glass Surfaces for High Density Microarrays,” Molecular Biosystems, 2012, pp. 879-887. vol. 83. [cited by applicant]
Fodor, et al., “Light-Direct, Spatially Addressable Parallel Chemical Synthesis”, Science, 1991, vol. 251, No. 4995: pp. 767-773. [cited by applicant]
Frija, et al., “Photochemical Transformations of Tetrazole Derivatives: Applications in Organic Synthesis”, Molecules, 2010, vol. 15, No. 5: pp. 3757-3774. [cited by applicant]
Gutheil, et al., “N-to-C Solid-Phase Peptide and Peptide Trifluoromethylketone Synthesis Using Amino Acid tert-Butyl Esters”, Chem. Pharm. Bull, 2002, vol. 50, No. 5: pp. 688-691. [cited by applicant]
Pellois, et al., “Peptide Synthesis Based on t-Boc Chemistry and Solution Photogenerated Acids”, J. Combinatorial Chem., 2000, vol. 2, No. 4: pp. 355-360. [cited by applicant]
Ballew, J.T., “Antibody Biomarker Discovery Through in Vitro Directed Evolution of Consensus Recognition Epitopes,” Proceedings of the National Academy of Sciences of the United States of America, Nov. 26, 2013, pp. 193… [cited by applicant]
Buus, S. et al., “High-Resolution Mapping of Linear Antibody Epitopes Using Ultrahigh-Density Peptide Microarrays,” Molecular & Cellular Proteomics, Dec. 2012, pp. 1790-1800, vol. 11, No. 12. [cited by applicant]
Choung, R.S. et al., “Determination of B-Cell Epitopes in Patients with Celiac Disease: Peptide Microarrays,” PLOS One, e0147777, Jan. 29, 2016, pp. 1-16, vol. 11, No. 1. [cited by applicant]
Fathalla, E., et al., “Efficient Synthesis of 1-Substituted-4-phenyl-1, 4-dihydro-5H-tetrazole-5-thione and (1-Phenyl-1H-tetrazol-5-yl)thiozcetyl Derivatives,” Heteroatom Chemistry, 2007, vol. 18, No. 6, pp. 637-643. [cited by applicant]
Gomez-Zavaglia, A., et al., “Molecular structure, vibrational spectra and photochemistry of 5-mercapto-1-methyltetrazole,” Journal of Molecular Structure, 2006, vol. 786, pp. 182-192. [cited by applicant]
Sun, X. et al., Bicyclic Guanidinium Tetraphenylborate: A Photobase Generator and A Photocatalyst for Living Anionic, J. Am. Chem. Soc., 2008, vol. 130, No. 26, pp. 8130-8131. [cited by applicant]
United States Office Action, U.S. Appl. No. 14/941,404, filed Dec. 11, 2018, 9 pages. [cited by applicant]
United States Office Action, U.S. Appl. No. 15/120,452, filed Sep. 18, 2017, 14 pages. [cited by applicant]
United States Office Action, U.S. Appl. No. 15/977,951, filed Aug. 30, 2019, 21 pages. [cited by applicant]
United States Office Action, U.S. Appl. No. 16/019,449, filed Apr. 29, 2019, 7 pages. [cited by applicant]
Mayall et al., “Deoxyribonucleic acid cytophotometry of stained human leukocytes II. The mechanical scanner of CYDAC, the theory of scanning photometry and the magnitude of residual errors.” Journal of Histochemistry & … [cited by applicant]
Ma et al., “A homogenous microarray for enzymatic functional assays.” In Frontiers in Biochip Technology, pp. 3-18. Springer, Boston, MA, 2006. [cited by applicant]
Extended European Search Report for EP 22199989.9, received on Mar. 14, 2023, 12 pages. [cited by applicant]
Uptima, “Diazirine crosslinkers,” Uptima, available online at https://www.interchim.fr/fUD/DW8561.pdf, 4 pages (first available 2012 per Google) (Year: 2012). [cited by applicant]
Wikipedia, “Diazirine,” Wikipedia, available online at https://en.wikipedia.org/wiki/Diazirine#:-:text=In%20organic%20chemistry%2C %20diazirines%20are,diazirine%20(%3ECN%202), 10 pages (accessed on Mar. 13, 24) (Year: 2… [cited by applicant]
Wikipedia, “Hydrazine”, Wikipedia, available online at https://en.wikipedia.org/wiki/Hydrazine#:-:text=and%20emergency%20response.-, Molecular%20structure,electron%20diffraction%20and%20microwave%20spectroscopy, 16 page… [cited by applicant]