IP Library › Granted Patent US 12,569,512
Granted Patent B2
US 12,569,512 · App. 17/744,407 · Granted Mar 10, 2026

Heparan sulfate (HS) oligosaccharides effect in liver ischemia reperfusion injury

Inventors: Katelyn Arnold (Chapel Hill, NC); Jian Liu (Chapel Hill, NC); Rafal Pawlinski (Chapel Hill, NC); Brian Cooley (Chapel Hill, NC)
Assignee: The University of North Carolina at Chapel Hill
A61K31/727A61P1/16A61P7/02
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Quick Facts
Patent No.
US 12,569,512
App. No.
17/744,407
Granted
Mar 10, 2026
Kind
B2
Abstract

Disclosed is a method of treating liver ischemia reperfusion (I/R) injury in a subject. In some aspects, the method comprises providing a subject suffering from liver I/R injury or at risk of suffering liver I/R injury; and administering to the subject one or more heparan sulfate (HS) compounds. In some aspects, the one or more HS compounds comprises about 5 to about 18 saccharide units, optionally about 12 to about 18 saccharide units. In some aspects, the one or more HS compounds comprises about 12 saccharide units.

Claims (27)

1 . A method of treating a subject suffering from liver ischemia reperfusion (I/R) injury or at risk of suffering liver I/R injury,

the method comprising administering to the subject one or more synthetic heparan sulfate (HS) compounds, wherein:

(i) the one or more synthetic HS compounds comprise a synthetic HS compound having the following structure:

wherein R 1 is —SO 3 H or —COCH 3 and R 2 is —H, alkyl, aryl, substituted alkyl, substituted aryl, or a functional handle;

(ii) the one or more synthetic HS compounds comprise one synthetic HS compound having the structure GlcNS6S-GlcA-GlcNS6S-IdoA2S-GlcNS6S-IdoA2S-GlcNS6S-IdoA2S-GlcNS6S-IdoA2S-GlcNS6S-GlcA-pNP and comprise one synthetic HS compound having the structure:

wherein R is —H, alkyl, aryl, substituted alkyl, substituted aryl, or a functional handle; and

wherein R 1 =H and n=1; R 1 =H and n=2; R 1 =GlcNS- or GlcNS6S- and n=1; or where R 1 =GlcA-GlcNS- or GlcA-GlcNS6S- and n=1; or

(iii) the one or more synthetic HS compounds comprise a synthetic HS compound having the structure:

wherein R 1 is —SO 3 H or —H and R 2 is —H, alkyl, aryl, substituted alkyl, substituted aryl, or a functional handle.

2 . The method of claim 1 , wherein the one or more synthetic HS compounds comprises a synthetic HS compound having the following structure:

wherein R 1 is —SO 3 H and R 2 —H, alkyl, aryl, substituted alkyl, substituted aryl, or a functional handle.

3 . The method of claim 1 , wherein the one or more HS compounds comprises a synthetic HS compound having the following formula:

wherein R 1 is —SO 3 H or —H and R 2 is —H, alkyl, aryl, substituted alkyl, substituted aryl, or a functional handle.

4 . The method of claim 1 , wherein the one or more synthetic HS compounds comprises a synthetic HS compound having the following formula:

wherein R is —H, alkyl, aryl, substituted alkyl, substituted aryl, or a functional handle; and

wherein

R1=H and n=1;

R1=H and n=2;

R 1 =GlcNS- or GlcNS6S and n=1; or

R 1 =GlcA-GlcNS or GlcA-GlcNS6S and n=1.

5 . The method of claim 1 , wherein the one or more synthetic HS compounds comprises a synthetic HS compound having the following formula:

wherein R is —H, alkyl, aryl, substituted alkyl, substituted aryl, or a functional handle.

6 . The method of claim 1 , wherein at least one of the one or more synthetic HS compounds binds HMGB1.

7 . The method of claim 1 , wherein the subject in need of treatment is a mammalian subject.

8 . The method of claim 1 , wherein the one or more synthetic HS compounds is administered as part of a pharmaceutical composition.

9 . The method of claim 8 , wherein the pharmaceutical composition comprises a synthetic HS compound and a pharmaceutically acceptable carrier or adjuvant for administration of the synthetic HS compound.

10 . The method of claim 1 , wherein the administering comprises administering two or more synthetic HS compounds, optionally wherein the two or more synthetic HS compounds are administered separately but at the same time, optionally wherein the two or more synthetic HS compounds are administered at different times, optionally wherein the two or more synthetic HS compounds are administered in a single composition.

Assignments (1)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jul 1, 2022
From: ARNOLD, KATELYN; LIU, JIAN; PAWLINSKI, RAFAL; COOLEY, BRIAN
To: THE UNIVERSITY OF NORTH CAROLINA AT CHAPEL HILL
Reel/Frame 060418/0927 →
Continuity (3)
Continuation PCTUS2020060581 · Nov 13, 2020
Provisional Application 62934845 · Nov 13, 2019
Related Publication 20220265699A1 · Aug 25, 2022
References Cited (400)
US 4554101A · Hopp · 1985 [cited by applicant]
US 4865870A · Hu et al. · 1989 [cited by applicant]
US 5527785A · Bevilacqua et al. · 1996 [cited by applicant]
US 5543403A · Petitou et al. · 1996 [cited by applicant]
US 5817487A · Kobayashi et al. · 1998 [cited by applicant]
US 5834282A · Habuchi et al. · 1998 [cited by applicant]
US 5935824A · Sgariato · 1999 [cited by applicant]
US 6255088B1 · Wong et al. · 2001 [cited by applicant]
US 6608044B1 · Aderka et al. · 2003 [cited by applicant]
US 6861254B1 · Rosenberg et al. · 2005 [cited by applicant]
US 6977248B1 · Shukla et al. · 2005 [cited by applicant]
US 7101859B2 · Yedgar et al. · 2006 [cited by applicant]
US 7531338B2 · Liu · 2009 [cited by applicant]
US 9951149B2 · Liu et al. · 2018 [cited by applicant]
US 10286047B2 · Spirig et al. · 2019 [cited by applicant]
US 11203772B2 · Xu et al. · 2021 [cited by applicant]
US 11633424B2 · Liu et al. · 2023 [cited by applicant]
US 11865137B2 · Arnold et al. · 2024 [cited by applicant]
US 11903963B2 · Liu et al. · 2024 [cited by applicant]
US 11993627B2 · Liu et al. · 2024 [cited by applicant]
US 20030083294A1 · Sullenger · 2003 [cited by applicant]
US 20030099967A1 · Deangelis · 2003 [cited by applicant]
US 20040087492A1 · Yedgar et al. · 2004 [cited by applicant]
US 20040191870A1 · Rosenberg et al. · 2004 [cited by applicant]
US 20040259142A1 · Chai et al. · 2004 [cited by applicant]
US 20050090601A1 · Dadalas et al. · 2005 [cited by applicant]
US 20050090661A1 · Asari et al. · 2005 [cited by applicant]
US 20050101532A1 · Yang et al. · 2005 [cited by applicant]
US 20050191288A1 · Bennett et al. · 2005 [cited by applicant]
US 20050225562A1 · Higgins et al. · 2005 [cited by applicant]
US 20050255562A1 · Rosenberg et al. · 2005 [cited by applicant]
US 20050282775A1 · Kennedy · 2005 [cited by applicant]
US 20060165673A1 · Liu · 2006 [cited by applicant]
US 20060172931A1 · San Antonio et al. · 2006 [cited by applicant]
US 20060229276A1 · Hook et al. · 2006 [cited by applicant]
US 20080109236A1 · DeAngelis · 2008 [cited by applicant]
US 20090035787A1 · Lju · 2009 [cited by applicant]
US 20090155851A1 · Sugiura et al. · 2009 [cited by applicant]
US 20090197308A1 · Liu et al. · 2009 [cited by applicant]
US 20100125052A1 · Lu et al. · 2010 [cited by applicant]
US 20100298260A1 · Sundaram et al. · 2010 [cited by applicant]
US 20100305022A1 · Shriver · 2010 [cited by applicant]
US 20110054236A1 · Yang et al. · 2011 [cited by applicant]
US 20110281819A1 · Kakehi et al. · 2011 [cited by applicant]
US 20120064044A1 · Egan · 2012 [cited by applicant]
US 20120308546A1 · Kizhakkedathu et al. · 2012 [cited by applicant]
US 20120322114A1 · Liu et al. · 2012 [cited by applicant]
US 20120322760A1 · Fier et al. · 2012 [cited by applicant]
US 20130022647A1 · Kizhakkedathu et al. · 2013 [cited by applicant]
US 20130296540A1 · Xu et al. · 2013 [cited by applicant]
US 20130338097A1 · Stephens et al. · 2013 [cited by applicant]
US 20160122446A1 · Liu et al. · 2016 [cited by applicant]
US 20210137967A1 · Liu et al. · 2021 [cited by applicant]
US 20210169923A1 · Arnold et al. · 2021 [cited by applicant]
US 20210260098A1 · Liu et al. · 2021 [cited by applicant]
US 20210332076A1 · Liu et al. · 2021 [cited by applicant]
US 20220416486A1 · Yamaguchi · 2022 [cited by applicant]
US 20240066048A1 · Liu et al. · 2024 [cited by applicant]
US 20240216419A1 · Arnold et al. · 2024 [cited by applicant]
US 20240309035A1 · Liu et al. · 2024 [cited by applicant]
AU 2003247808A1 · 2004 [cited by applicant]
CN 103402526A · 2013 [cited by applicant]
CN 111601603A · 2020 [cited by applicant]
CN 112437667A · 2021 [cited by applicant]
CN 105452479B · 2021 [cited by applicant]
CN 114980904A · 2022 [cited by applicant]
EP 0394971 · 1990 [cited by applicant]
EP 0565863A · 1993 [cited by applicant]
JP 2002534375A · 2002 [cited by applicant]
JP 2005508827A · 2005 [cited by applicant]
JP 2011168591A · 2011 [cited by applicant]
JP 2014501730A · 2014 [cited by applicant]
JP 2016523535A · 2016 [cited by applicant]
JP 2021502470A · 2021 [cited by applicant]
JP 2021528421A · 2021 [cited by applicant]
JP 2023501568A · 2023 [cited by applicant]
JP 2023166387A · 2023 [cited by applicant]
JP 2024056723A · 2024 [cited by applicant]
JP 7495061B · 2024 [cited by applicant]
JP 753872482 · 2024 [cited by applicant]
WO WO8904328 · 1989 [cited by applicant]
WO WO9305167A1 · 1993 [cited by applicant]
WO WO9614425 · 1996 [cited by applicant]
WO WO0151003A2 · 2001 [cited by applicant]
WO WO2003018598 · 2003 [cited by applicant]
WO WO2004005475A2 · 2004 [cited by applicant]
WO WO2005118609 · 2005 [cited by applicant]
WO WO2009079693A1 · 2009 [cited by applicant]
WO WO2012088416A2 · 2012 [cited by applicant]
WO WO2012116048A1 · 2012 [cited by applicant]
WO WO2014204929A2 · 2014 [cited by applicant]
WO WO2018165656A1 · 2018 [cited by applicant]
WO WO2019010216A1 · 2019 [cited by applicant]
WO WO2019090203A1 · 2019 [cited by examiner]
WO WO2019246264 · 2019 [cited by applicant]
Cole, C. et al “Synthetic heparan sulfate oligosaccharides . . . ” Plos One, vol. 5, iss 7, pp. 1-15. (Year: 2010). [cited by examiner]
Arnold, Scientific reports, 2020, vol. 10(1), p. 17187, Oct. 14, 2020. (Year: 2020). [cited by examiner]
Harada, Thromb Haemost 2007; 97: 81-87. (Year: 2007). [cited by examiner]
Hagiwara, Critical Care 2008, 12:R43), abstract. (Year: 2008). [cited by examiner]
Orgaran, Product Monograph—HIT for danaparoid sodium, Feb. 9, 2018. (Year: 2018). [cited by examiner]
Advisory Action corresponding to U.S. Appl. No. 13/996,930 dated Dec. 9, 2016, 6 Pages. [cited by applicant]
Aikawa, J.I., et al., “Molecular Cloning and Expression of a Third Member of the Heparan Sulfate/Heparin GlcNAc N-Deacetylase/N-Sulfotransferase Family,” The Journal of Biological Chemistry, vol. 274, No. 5, 1999, pp. 2… [cited by applicant]
Aikawa, J.I., et al., “Multiple Isozymes of Heparan Sulfate/Heparin GlcNAc N-Deacetylase/GlcN N-Sulfotransferase,” The Journal of Biological Chemistry, vol. 276, No. 8, pp. 5876-5882 (Feb. 23, 2001). [cited by applicant]
Antoine, D.J., et al., “Mechanistic Biomarkers Provide Early and Sensitive Detection of Acetaminophen-Induced Acute Liver Injury at First Presentation to Hospital,” Hepatology vol. 58, pp. 777-787 (2013). [cited by applicant]
Applicant-Initiated Interview Summary corresponding to U.S. Appl. No. 13/996,930 dated Jan. 23, 2017. [cited by applicant]
Arnold, K., et al., “Design of Anti-Inflammatory Heparan Sulfate to Protect Against Acetaminophen-Induced Acute Liver Failure,” Sci. Transl. Med., vol. 12, No. 535, pp. 1-26, Article ID eaav8075 (Mar. 18, 2020). [cited by applicant]
Arnold, K., et al., “Potential Use of Anti-Inflammatory Synthetic Heparan sulfate to attenuate liver damage,” Biomedicines 2020 8(11), 503. [cited by applicant]
Arungundram, S., et al., “Modular Synthesis of Heparan Sulfate Oligosaccharides for Structure-Activity Relationship Studies,” J. Am. Chem. Soc., vol. 131, pp. 17394-17405, Dec. 2, 2009. [cited by applicant]
Axelsson, J., et al., “Inactivation of Heparan Sulfate 2-O-Sulfotransferase Accentuates Neutrolphil Infiltration During Acute Inflammation in Mice,” Blood, vol. 120, pp. 1742-1751 (2012). [cited by applicant]
Bailey, G.P., et al., “Delays During the Administration of Acetylcysteine for the Treatment of Paraacetamol Overdose,” Br. J. Clin. Pharmacol. vol. 62, pp. [cited by applicant]
Baleux, F., et al., “A Synthetic CD4-Heparan Sulfate Glycoconjugate Inhibits CCR5 And CXCR4 HIV-1 Attachment and Entry,” Nat. Chem. Biol., vol. 5, No. 10, pp. 743-748, Oct. 2009. [cited by applicant]
Beeson, J.G., et al., “Inhibition of Binding of Malaria-Infected Erythrocytes by a Tetradecasaccharide Fraction from Chondroitin Sulfate A,” Infection and Immunity, vol. 66 No. 7 pp. 3397-3402 (Year: 1998). [cited by applicant]
Belot, F., et al., “Syntheses of Chondroitin 4- and 6-Sulfate Pentasaccharide Derivatives Having a Methyl Beta-D-Glucopyranosiduronic Acid at the Reducing End,” Carbohyd. Res., vol. 326, pp. 88-97. (Year: 2000). [cited by applicant]
Bianchi, M.E., et al., “High-Mobility Group Box 1 Protein Orchestrates Responses to Tissue Damage via Inflammation, Innate and Adaptive Immunity, and Tissue Repair,” Immunol. Rev. vol. 280, pp. 74-82 (2017). [cited by applicant]
Bitter T., et al., “A Modified Uronic Acid Carbazole Reaction,” Anal. Biochem., vol. 4, pp. 330-334, 1962. [cited by applicant]
Blieden, M., et al., “A Perspective on the Epidemiology of Acetaminophen Exposure and Toxicity in the United States,” Expert Rev. Clin. Pharmacol. vol. 7, pp. 341-348 (2014). [cited by applicant]
Bourgeaux, V., et al., “Two-Step Enzymatic Synthesis of UDP-N-Acetylgalactosamine,” Bioorg. Med. Chem. Lett., vol. 15, pp. 5459-5462 (2005). [cited by applicant]
Bowman, K.G., et al., “Carbohydrate Sulfotransferases: Medliators of Extracellular Communication,” Chemistry & Biology, vol. 6, pp. R9-R22 (Jan. 1999). [cited by applicant]
Bradbury, E.J., et al., “Chondroitinase ABC Promotes Functional Recovery After Spinal Cord Injury,” Nature, vol. 416, pp. 636-640 (2002). [cited by applicant]
Brinkmann, V., et al., “Neutrophil Extracellular Traps Kill Bacteria,” Science, vol. 303, pp. 1532-1535, 2004. [cited by applicant]
Broun, P., et al., “Catalytic plasticity of fatty acid modification enzymes underlying chemical diversity of plant lipids,” Science, vol. 282, pp. 1315-1317 (1998). [cited by applicant]
Brown, J. M., et al., “A Sulfated Carbohydrate Epitope Inhibits Axon Regeneration After Injury,” Proc. Natl. Acad. Sci. USA, vol. 109, pp. 4768-4773 (2012). [cited by applicant]
Brown, L., et al., “Cardenolide Analogues. 11. Improved Method for the Use of Fetizon's Reagent in the Synthesis of Cardiac Glycosides,” Drug Research, vol. 31, No. 7, pp. 1059-1064 (1981). [cited by applicant]
Burkart, M. D., et al., “Regeneration of PAPS for the Enzymatic Synthesis of Sulfated Oligosaccharides,” J. Org. Chem., vol. 65, pp. 5565-5574 (2000). [cited by applicant]
Cai. C., et al., “Towards the Chemoenzymatic Synthesis of Heparan Sulfate Oligosaccharides: Oxidative Cleavage of P-Nitrophenyl Group With Ceric Ammonium Salts,” Tetra. Lett., vol. 54, No. 33, pp. 4471-4474 (2013). [cited by applicant]
Capila, I., et al., “Heparin—Protein Interactions,” Angew. Chem. Int. Ed., vol. 41, pp. 390-412 (2002). [cited by applicant]
Carfi, A., et al., “Herpes Simplex Virus Glycoprotein D Bound to the Human Receptor HveA,” Molecular Cell, vol. 8, pp. 169-179 (Jul. 2001). [cited by applicant]
Cassinelli, G., et al., “Old and New Applications of Non-Anticoagulant Heparin,” International Journal of Cardiology, 212S1 pp. S14-S21 (2016). [cited by applicant]
Casu, B., et al., “Heparin-Like Compounds Prepared by Chemical Modification of Capsular Polysaccharide From [cited by applicant]
Chan, S., et al., “Regulation of Pfemp1-VAR2CSA Translation by a Plasmodium Translation-Enhancing Factor,” Nature Microbiology, vol. 2, Article No. 17068 (May 8, 2017). [cited by applicant]
Chen, G, Y., et al., “Sterile Inflammation: Sensing and Reacting to Damage,” Nat. Immunol. vol. 10, pp. 826-837 (2010). [cited by applicant]
Chen, J., et al., “Using an Enzymatic Combinatorial Approach to Identify Anticoagulant Heparan Sulfate Structures,” Chemistry and Biology, Current Biology, London, GB, vol. 14., No. 9, pp. 986-993 (Sep. 19, 2007). [cited by applicant]
Chen, M., et al., “Determination of the Substrate Specificities of N-Acetyl-D-glucosaminyltransferase,” Biochemistry, vol. 45, pp. 12358-12365, 2006. [cited by applicant]
Chen, R., et al., “Release and Activity of Histone in Disease,” Cell Death and Disease, vol. 5, No. 8, e1370, Aug. 14, 2014. [cited by applicant]
Chen., et al., Towards De Novo Synthesis of Structure-Defined Oligosaccharides with Heparan Sulfate Biosynthetic Enzymes, PhD dissertation. 1-167, (Date Created: Aug. 2008; Date Deposited: Oct. 11, 2010.). [cited by applicant]
Clark, S. R., et al., “Platelet TLR4 activates neutrophil extracellular traps to ensnare bacteria in septic blood,” Nat Med., vol. 13, No. 4, pp. 463-469, 2007. [cited by applicant]
Communication of European publication number and information on the application of Article 67(3) EPC corresponding to European Application No. 14812890.3 dated Mar. 31, 2016. [cited by applicant]
Communication of European publication number corresponding to European Patent application No. 20887629.2 dated Jul. 20, 2022. [cited by applicant]
Communication of the extended European search report corresponding to European Application No. 14812890.3 dated Dec. 21, 2016. [cited by applicant]
Communication of the extended European Search report corresponding to European Patent Application No. 20887629.2 dated Oct. 27, 2023. [cited by applicant]
Communication pursuant to Article 94(3) EPC Corresponding to European Patent Application No. 19822610.2- 1109 dated Sep. 30, 2024, p. 5. [cited by applicant]
Communication under Rule 71(3) EPC (Intention to Grant) corresponding to European Patent Application No. 18873131.9-1109 dated Oct. 16, 2024, 7 Pages. [cited by applicant]
Conrad, H, E., “Heparin-Binding Proteins,” J. of Medicinal Chemistry, vol. 42, No. 4, pp. 777-778 (1998). [cited by applicant]
Copeland, R., et al., “Using a 3-O-Sulfated Heparin Octasaccharide to Inhibit the Entry of Herpes Simplex Virus Type 1,” Biochemistry, vol. 47, pp. 5774-5783 (2008). [cited by applicant]
Corrected Notice of Allowance corresponding to U.S. Appl. No. 16/492,858 dated Sep. 20, 2022. [cited by applicant]
Coutant. C., et al., “2-Deoxy-2-Trichloroacetamido-D-Glucopyranose Derivatives in Oligosaccharide Synthesis: From Hyaluronic Acid to Chondroitin 4-Sulfate Trisaccharides” J Chem Soc Perkin Trans 1, pp. 1573-1581 (Year: … [cited by applicant]
Crowther, M. A., et al., “Mechanisms Responsible for the Failure of Protamine to Inactivate Low-Molecular-Weight Heparin,” British Journal of Hematology, vol. 116, pp. 178-186 (2002). [cited by applicant]
Darden, T., et al., “Particle Mesh Ewald: an N.Log(N) Method for Ewald Sums in Large Systems,” J. Chem. Phys. 1993, vol. 98, No. 12, pp. 10089-10092. [cited by applicant]
Das, S.K., et al., “Synthesis of Conformationally Locked I-Iduronic Acid Derivatives: Direct Evidence for a Critical Role of the Skew-Boat 280 Conformer in the Activation of Antithrombin by Heparin,” Chem. Eur. J., vol.… [cited by applicant]
Davenport, A., “Review Article: Low-Molecular-Weight Heparin as an Alternative Anticoagulant to Unfractionated Heparin for Routine Outpatient Haemodialysis Treatments,” Nephrology, vol. 14, pp. 455-461 (2009). [cited by applicant]
Deagostini, A.I., et al., “Human Follicular Fluid Heparan Sulfate Contains Abundant 3-O-Sulfated Chains with Anticoagulant Activity,” J. Biol. Chem., vol. 283, pp. 28115-28124, Oct. 17, 2008. [cited by applicant]
Decision to Grant corresponding to Japanese Patent Application No. 2016521505 dated Feb. 3, 2020. [cited by applicant]
Decision to Grant corresponding to Japanese Patent Application No. 2019549419 dated Jul. 11, 2023. [cited by applicant]
Dooley, T.P., “Cloning of the Human Phenol Sulfotransferase Gene Family: Three Genes Implicated in the Metabolism of Catecholamines, Thyroid Hormones and Drugs,” Chemico-Biological Interactions, vol. 109, pp. 29-41 (199… [cited by applicant]
Dou, W., et al., “Role of Deacetylase Activity of N-Deacetylase/N-Sulfotransferase 1 in Forming N-Sulfated Domain in Heparan Sulfate”, The Journal of Biological Chemistry, vol. 290, No. 33, pp. 20427-20437 (Aug. 14, 201… [cited by applicant]
Edens, R.E., et al., “Gradient Polyacrylamide Gel Electrophoresis for Determination of Molecular Weights of Heparin Preparations and Low-Molecular-Weight Heparin Derivatives,” J. Pharm. Sci., vol. 81, No. 8, pp. 823-827… [cited by applicant]
Eller, S., et al., “Automated Solid-Phase Synthesis of Chondroitin Sulfate Glycosaminoglycans,” Angew. Chem. Int. Ed., vol. 52, pp. 5858-5861 (2013). [cited by applicant]
Esko, J,D., et al., “Molecular diversity of heparan sulfate,” J. Clin. Invest., vol. 108, pp. 169-173 (2001). [cited by applicant]
European Search Report corresponding to European Patent Application No. 18764628.6 dated Dec. 2, 2020. [cited by applicant]
European Search Report corresponding to European Patent Application No. 18873131.9 dated Jul. 12, 2021. [cited by applicant]
Patent Certificate for European Patent No. 3691653 dated Mar. 12, 2025. [cited by applicant]
Extended European Search Report Corresponding to European Patent Application No. 19822610.2 dated Mar. 29, 2022. [cited by applicant]
Falany, C.N., “Introduction: Changing view of sulfation and the cytosolic Sulfotransferases,” vol. 11, The FASEB Journal, pp. 1-2 (Jan. 1997). [cited by applicant]
Feltracco, P., et al., “Perioperative thrombotic complications in liver transplantation.” World J. Gastroenterol., vol. 21, pp. 8004-8013 (2015). [cited by applicant]
Feng, S., et al., “Characteristics Associated with Liver Graft Failure: the Concept of a Donor Risk Index.” Am. J. Transplant., vol. 6, pp. 783-790 (2006). [cited by applicant]
Feyerabend, T.B., et al., “Heparan sulfate C5-epimerase is essential for heparin biosynthesis in mast cells,” Nat. Chem. Biol., vol. 2, No. 4, pp. 195-196 (Apr. 2006). [cited by applicant]
Fiser, A., et al., “Modeller: Generation and Refinement of Homology-Based Protein Structure Models,” Methods Enzymol, vol. 374, pp. 461-491, 2003. [cited by applicant]
Frank, R.D., et al., “A non-anticoagulant synthetic pentasaccharide reduces inflammation in a murine model of kidney ischemia-reperfusion injury,” Thromb Haemost, vol. 96, pp. 802-806. (Dec. 2006). [cited by applicant]
Freeman, C,G., et al., “The accumulation of circulating histones on heparan sulphate in the capillary glycocalyx of the lungs.” Biomater., vol. 34, pp. 5670-5676 (2013). [cited by applicant]
Fried, M., et al., “Designing a VAR2CSA-based vaccine to prevent placental malaria.” Vaccine, vol. 33, pp. 7483-7488 (2015). [cited by applicant]
Fukuta, M., et al., “Molecular cloning and expression of human chondroitin 6-sulfotransferase,” Biochimica et Biophysica Acta, vol. 1399, pp. 57-61 (1998). [cited by applicant]
Fuster, J. J., et al., “The sweet and sour of cancer: glycans as novel therapeutic targets,” Nat. Rev. Cancer, vol. 5, No. 7, pp. 1-27 (Jul. 2005). [cited by applicant]
Gama, C.I., et al., “Sulfation patterns of glycosaminoglycans encode molecular recognition and activity,” Nat. Chem. Biol., vol. 2, No. 9, pp. 467-473 (Sep. 2006). [cited by applicant]
Ganey, P.E., et al. “Role of the Coagulation System in Acetaminophen-Induced Hepatotoxicity in Mice.” Hepatology, vol. 46(4), pp. 1177-1186 (2007). [cited by applicant]
Goddard-Borger, E. D., et al., “An Efficient, Inexpensive and Shelf-Stable Diazotransfer Reagent: Imidazole-1-sulfonyl Azide Hydrochloride.” Org. Lett., vol. 9, pp. 3797-3800 (2007). [cited by applicant]
Guerrini, M., et al., “An unusual antithrombin-binding heparin octasaccharide with an additional 3-O-sulfated glucosamine in the active pentasaccharide sequence,” Biochem. J., vol. 449, pp. 343-351, 2013. [cited by applicant]
Guerrini, M., et al., “Antithrombin-binding oligosaccharides: structural diversities in a unique function?,” Glycoconj. J., vol. 31, 409, pp. 9, Aug. 2014. [cited by applicant]
Guerrini, M., et al., “Oversulfated chondroitin sulfate is a contaminant in heparin associated with adverse clinical events,” Nat. Biotechnol., vol. 26, No. 6, pp. 669-675 (Jun. 2008). [cited by applicant]
Habuchi, H., et al., “Molecular Characterization and Expression of Heparan-sulfate 6-Sulfotransferase—Complete cDNA Cloning in Human and Partial Cloning in Chinese Hamster Ovary Cells,” The Journal of Biological Chemist… [cited by applicant]
Habuchi, O., et al., “Purification of Chondroitin 6-Sulfotransferase Secreted from Cultured Chick Embryo Chondrocytes,” The Journal of Biological Chemistry, vol. 268(29), pp. 21968-21974 (1993). [cited by applicant]
Hajmohammadi, S., “Normal levels of anticoagulant heparan sulfate are not essential for normal hemostasis,” The Journal of Clinical Investigation, vol. 111, pp. 989-999, No. 7, Apr. 2003. [cited by applicant]
Hansen, S.U., Tetrasaccharide iteration synthesis of a heparin-like dodecasaccharide and radiolaballing for in vivo tissue distribution studies, Nature Communications 4, Article No. 2016 (2013). [cited by applicant]
Harada, N., et al., “Dalteparin, a low molecular weight heparin, attenuates inflammatory responses and reduces ischemia-reperfusion-induced liver injury in rats.” Crit. Care Med., vol. 34, Article No. 8, (2006). [cited by applicant]
Harris, E.N., et al., “Endocytic Function, Glycosaminoglycan Specificity, and Antibody Sensitivity of the Recombinant Human 190-kDa Hyaluronan Receptor for Endocytosis (HARE),” J. Biol. Chem., vol. 279, No. 35, pp. 3620… [cited by applicant]
Heard, K.J., “Acetylcystein for acetaminophen poisoning,” N. Eng. J. Med. vol. 359, pp. 285-292 (2008). [cited by applicant]
Hirsch, J., et al., “Beyond Unfractionated Heparin and Warfarin Current and Future Advances,” Circulation, vol. 116, pp. 552-560 (2007). [cited by applicant]
Hirsch, J., et al., “Heparin and Low-Molecular-Weight Heparin the Seventh ACCP Conference on Antithrombotic and Thrombolytic Therapy,” CHEST, vol. 126, pp. 188S-203S (2004). [cited by applicant]
Hsieh, P-H., Uncovering the Relationship between Sulphation Patterns and conformation of Iduronic Acid in Heparan Sulphate, Scientific Reports, Article No. 29602 (2016). [cited by applicant]
Hsieh, P-H., et al., “Chemoenzymatic synthesis and structural characterization of 2-O-sulfated glucuronic acid containing heparan sulfate hexasaccharides.” Glycobiology vol. 24, pp. 681-692 (2014). [cited by applicant]
Hu, Y-P., et al.,“Synthesis of 3-O-sulfonated heparan sulfate octasaccharides that inhibit the herpes simplex virus type 1 host-cell interaction,” Nat Chem, vol. 3, pp. 557-563, Jul. 2011. [cited by applicant]
Huang, C. C., et al., “Enhancing UCSF Chimera through web services,” Nucleic Acids Res., vol. 42, pp. W478-W484, May 26, 2014. [cited by applicant]
Huebener, P., el al., “The HMGB1/RAGE axis triggers neutrophil-mediated injury amplification following necrosis.” J. Clin. Invest., vol. 125, pp. 539-550 (2015). [cited by applicant]
Humphrey, W., “VMD: Visual Molecular Dynamics,” J. Mol. Graph., vol. 14, pp. 33-38, 1996. [cited by applicant]
Iba et al., “Danaparoid sodium attenuates the increase in inflammatory cytokines and preserves organ function in endotoxemic rats,” Critical Care, vol. 12, Article No. R86 (7 pages) (2008). [cited by applicant]
Iba, T., et al., “Advance in the management of sepsis-induced coagulopathy and disseminated intravascular coagulation.” J. Clin. Med., vol. 8, Article No. 728 (16 pages) (2019). [cited by applicant]
Intention to Grant corresponding to European Patent Application No. 11849994.6 dated Apr. 7, 2021. [cited by applicant]
Intention to Grant corresponding to European Patent Application No. 11849994.6 dated Sep. 1, 2021. [cited by applicant]
Intention to Grant corresponding to European Patent Application No. 14812890.3 dated Oct. 27, 2021. [cited by applicant]
International Preliminary Report on Patentability corresponding to International Application No. PCT/US2018/040774 dated Jan. 7, 2020. [cited by applicant]
International Preliminary Report on Patentability corresponding to International Application No. PCT/US2019/037993 dated Dec. 22, 2020. [cited by applicant]
International Preliminary Report on Patentability Corresponding to International Patent Application No. PCT/US2020/060581 dated May 17, 2022. [cited by applicant]
International Preliminary Report on Patentability corresponding to International Application No. PCT/US2014/042683 dated Dec. 22, 2015. [cited by applicant]
International Preliminary Report on Patentability corresponding to International Application No. PCT/US2011/066843 dated Jun. 25, 2013. [cited by applicant]
International Preliminary Report on Patentability Corresponding to International application No. PCT/US2018/021986 dated Sep. 10, 2019. [cited by applicant]
International Preliminary Report on Patentability corresponding to international application No. PCT/US2018/059152 dated May 5, 2020. [cited by applicant]
International Search Report and the Written Opinion of the International Searching Authority Corresponding to International Application No. PCT/US2018/040774 dated Sep. 18, 2018. [cited by applicant]
International Search Report and the Written Opinion of the International Searching Authority corresponding to international application No. PCT/US2018/059152 dated Mar. 6, 2019. [cited by applicant]
International Search Report and Written Opinion of the International Searching Authority Corresponding to International Patent Application No. PCT/US2020/060581 dated Feb. 11, 2021. [cited by applicant]
International Search Report corresponding to International Application No. PCT/US2019/037993 dated Oct. 18, 2019. [cited by applicant]
International Search Report corresponding to International Application No. PCT/US2014/042683 dated Oct. 9, 2014. [cited by applicant]
International Search Report Corresponding to International application No. PCT/US 2018/021986 dated Aug. 1, 2018. [cited by applicant]
Jackson, S,P., et al., “Thromboinflammation: challenges of therapeutically targeting coagulation and other host defense mechanisms.” Blood, vol. 133, pp. 906-918 (2019). [cited by applicant]
Jaeschke, H., et al., “Complement activates Kupffer cells and neutrophils during reperfusion after hepatic ischemia.” Am. J. Physiol-Gastroint. Liver Physiol., vol. 264, pp. G801-G809 (1993). [cited by applicant]
Jaimes, F., et al., “Unfractioned heparin for treatment of sepsis: a randomized clinical trial (The HETRASE Study).” Crit. Care Med., vol. 37, pp. 1185-1196 (2009). [cited by applicant]
Jemth, P., et al., “Oligosaccharide library-based assessment of heparan sulfate 6-0-sulfotransferase substrate specificity,” Journal of Biological Chemistry, vol. 278, No. 27, pp. 24371-24376 (Jul. 4, 2003). [cited by applicant]
Jin, L., et al., “The anticoagulant activation of antithrombin by heparin,” Proc. Natl. Acad. Sci., vol. 94, pp. 14683-14688, Dec. 1997. [cited by applicant]
Kakkar, A, K., et al., “Low Molecular Weight Heparin, Therapy With Dalteparin, and Survival in Advanced Cancer: the Fragmin Advanced Malignancy Outcome Study (FAMOUS),” J. Clin. Oncol., vol. 22, No. 10, pp. 1944-1948 (M… [cited by applicant]
Kakuta, Y., et al., “Heparan sulphate N-sulphotransferase activity: reaction mechanism and substrate recognition,” Biochem. Soc. Trans., vol. 31 (pt2), pp. 331-334 (2003). [cited by applicant]
Kamimura, K., et al., Regulation of Notch signaling by [cited by applicant]
Kaneko, J., et al., “Coagulation and fibrinolytic profiles and appropriate use of heparin after living-donor liver transplantation.” Clin. Transplant., vol. 19, pp. 804-809 (2005). [cited by applicant]
Kirschner, K. N., et al., “GLYCAM06: a Generalized Biomolecular Force Field. Carbohydrates,” J. Comput. Chem., vol. 29, No. 4, pp. 622-655, Mar. 2008. [cited by applicant]
Kisselev, L., “Polypeptide release factors in prokaryotes and eukaryotes: same function, different structure,” Structure, vol. 10, pp. 8-9 (2002). [cited by applicant]
Kollman, P., A., et al., “Calculating Structures and Free Energies of Complex Molecules: Combining Molecular Mechanics and Continuum Models,” Acc. Chem. Res., vol. 33, pp. 889-897, 2000. [cited by applicant]
Konishi. T., et al., “Hepatic ischemia/reperfusion: mechanisms of tissue injury, repair, and regeneration.” Gene Expr., vol. 17, pp. 277-287 (2017). [cited by applicant]
Kopec, A, K., et al., “Fibrin(ogen) drives repair after acetaminophen-induced liver injury via leukocyte aMb2 integrin-dependent upregulation of Mmp12.” J. Hepatol., vol. 66, pp. 787-797 (2017). [cited by applicant]
Kreimann, M., et al., “Binding of anti-platelet factor 4/heparin antibodies depends on the thermodynamics of conformational changes in platelet factor 4,” Blood, vol. 124, No. 15, pp. 2442-2449, Oct. 9, 2014. [cited by applicant]
Kreuger,J., et al., “Interactions between heparan sulfate and proteins: the concept of specificity,” J. Cell Biol., vol. 174, No. 3, pp. 323-327 (Jul. 31, 2006). [cited by applicant]
Kuberan, B., et al., “Enzymatic synthesis of antithrombin III-binding heparan sulfate pentasaccharide,” Nature Biotechnology, vol. 21, No. 11, 1343-1346 (Nov. 2003). [cited by applicant]
Kuberan, B., et al., The Journal of Biological Chemistry, “Chemoenzymatic Synthesis of Classic and Non-classical Anticoagulant Heparan Sulfate Polysaccharides”, 2003, vol. 278, No. 52, pp. 52613-52621 (Year: 2003). [cited by applicant]
Kubes, et al., “Sterile inflammation in the liver.” Gastroenterology, vol. 143, pp. 1158-1172 (2012). [cited by applicant]
Langdown, J.; Belzar, K. J.; Savory, W. J.; Baglin, T. P.; Huntington, J. A. J. Mo/. Biol. 2009, 386, 1278. [cited by applicant]
Laremore, T. et al “Ionic liquid matrix for direct UV-MALDI-TOF-MS Analysis of Dermatan Sulfate and Chondroitin Sulfate Oligosaccharides.” Anal. Chem., vol. 79, pp. 1604-1610. (Year: 2007). [cited by applicant]
Laurent et al., “The Molecular-Weight-Dependence of the Anti-Coagulant Activity of Heparin,” Biochem. J., vol. 175, pp. 691-701 (1978). [cited by applicant]
Ledin et al., “Heparan Sulfate Structure in Mice with Genetically Modified Heparan Sulfate Production,” J. Biol. Chem., vol. 279, No. 41, pp. 42732-42741 (2004). [cited by applicant]
Lee, “Acetaminophen toxicity: changing perceptions on a social/medical issue.” Hepatology, vol. 46, pp. 966-970 (2007). [cited by applicant]
Lee, M.K., and Lander, A.D., (1991) Proc. Natl. Acad. Sci. USA 88, 2768-2772. [cited by applicant]
Li et al., “Biosynthesis of Heparin/Heparan Sulfate cDNA Cloning and Expression of D-Glucuronyl C5-Epimerase From Bovine Lung,” J. Biol. Chem., vol. 272, No. 4, pp. 28158-28163 (Oct. 31, 1997). [cited by applicant]
Li et al., “Enzymatic Synthesis of Homogeneous Chondroitin Sulfate Oligosaccharides.” Angew. Chemie., vol. 129(39), pp. 11946-11949 (2017). [cited by applicant]
Li et al., “Enzymatic synthesis of homogenous chondroitin sulfate e oligosaccharides,” Abstract of Glycobiol., vol. 28(12) (2018) [Abstract]. [cited by applicant]
Li J. Su W, and Liu J. “Enzymatic synthesis of homogeneous chondroitin sulfate oligosaccharides.” Angew Chem Int Ed. 2017; 56:11784-7. [cited by applicant]
Li, J., et al., “Enzymatic Synthesis of Chondroitin Sulfate E to Attenuate Bacteria Lipopolysaccharide-induced Organ Damage,” ACS Central Science, vol. 6, No. 7, pp. 1199-1207, Jul. 1, 2020. [cited by applicant]
Li, L., et al., “Top-down approach for the direct characterization of low molecular weight heparins using LC-FT-MS,” Anal. Chem., vol. 84, No. 20, pp. 8822-8829, Oct. 16, 2012. [cited by applicant]
Liliensiek et al., “Receptor for advanced glycation end products (RAGE) regulates sepsis but not the adaptive immune response.” J. Clin. Invest. vol. 113, pp. 1641-1650 (2004). [cited by applicant]
Lindahl et al., “Regulated Diversity of Heparan Sulfate,” The Journal of Biological Chemistry, vol. 273, No. 39, pp. 24979-24982 (Sep. 25, 1998). [cited by applicant]
Lindahl, U.; Backstrom, G.; Thunberg, L.; Leder, I. G. Proc. Natl. Acad. Sci. 1980, 77, 6551-6555. [cited by applicant]
Linhardt et al., “Production and Chemical Processing of Low Molecular Weight Heparins,” Seminars in Thrombosis and Hemostasis, vol. 25, Suppl.3, pp. 5-16 (1999). [cited by applicant]
Liu et al., “Anticoagulant heparan sulfate: structural specificity and biosynthesis,” Appl Microbiol Biotechnol., vol. 74, pp. 263-272 (2007). [cited by applicant]
Liu et al., “Cell Surface Heparan Sulfate and Its Roles in Assisting Viral Infections,” Medicinal Research Reviews, vol. 22, No. 1, pp. 1-25 (2002). [cited by applicant]
Liu et al., “Characterization of a Heparan Sulfate Octasaccharide that Binds to Herpes Simplex Virus Type 1 Glycoprotein D,” The Journal of Biological Chemistry, vol. 277, No. 36, pp. 33456-33467 (Sep. 6, 2002). [cited by applicant]
Liu et al., “Expression of Heparan Sulfate D-Glucosaminyl 3-O-Sulfotransferase Isoforms Reveals Novel Substrate Specificities,” The Journal of Biological Chemistry, vol. 274, No. 8, pp. 5185-5192 (Feb. 19, 1999). [cited by applicant]
Liu et al., “Heparan Sulfate D-Glucosaminyl 3-O-Sulfotransferase-3A Sulfates N-Unsubstituted Glucosamine Residues,” The Journal of Biological Chemistry vol. 274, No. 53, pp. 38155-38162 (Dec. 31, 1999). [cited by applicant]
Liu et al., “Purification of Heparan Sulfate D-Glucosaminyl 3-O-Sulfotransferase,” The Journal of Biological Chemistry, vol. 271, No. 43, pp. 27072-27082 (Oct. 25, 1996). [cited by applicant]
Liu et al., Chemoenzymatic Design of Heparan Sulfate Oligosaccharides, J Biol Chem, vol. 285, No. 44, pp. 34240-34249 (Oct. 29, 2010). [cited by applicant]
Liu et al., “Enzymatic Placement of 6-O-Sulfo Groups in Heparan Sulfate,” Biochemistry 2011, 50, 4382-4391. [cited by applicant]
Liu et al., “Lessons learned from the contamination of heparin,” Nat. Prod. Rep., vol. 26, pp. 313-321 (2009). [cited by applicant]
Liu, J. et al., “Chemoenzymatic synthesis of heparan sulfate and heparin”, Royal Society of Chemistry, vol. 31, pp. 1676-1685 (Year: 2014). [cited by applicant]
Loganathan et al., “Structural Variation in the Antithrombin III Binding Site Region and Its Occurrence in Heparin from Different Sources,” Biochemistry, vol. 29, pp. 4362-4368 (1990). [cited by applicant]
Lopin et al., “From Polymer to Size-Defined Oligomers: an Expeditious Route for the Preparation of Chondroitin Oligosaccharides.” Angew. Chem. Int. Ed., vol. 45, pp. 2574-2578 (2006). [cited by applicant]
Lopin-Bon et al., “Stereocontrolled preparation of biotinylated chondroitin sulfate E di-, tetra-, and hexasaccharide conjugates.” Carbohydr. Res., vol. 402, pp. 35-43 (2015). [cited by applicant]
Lu et al., “Innate Immune Regulations and Liver Ischemia-Reperfusion Injury.” Trasplantation, vol. 100, pp. 2601-2610 (2016). [cited by applicant]
Lundbäck et al., “A novel high mobility group box 1 neutralizing chimeric antibody attenuates drug-induced liver injury and postinjury inflammation in mice.” Hepatology vol. 64, pp. 1699-1710 (2016). [cited by applicant]
Ly et al., “The proteoglycan bikunin has a defined sequence.” Nat. Chem. Biol., vol. 7, pp. 827-833 (2011). [cited by applicant]
Macchione et al., “Synthesis of chondroitin sulfate oligosaccharides using N-tetrachlorophthaloyl and N-trifluoroacetyl galactosamine building blocks,” European Journal of Organic Chemistry, pp. 3868-3884 (2014). [cited by applicant]
Mackman, “Triggers, targets and treatments for thrombosis,” Nature, vol. 451, No. 21, pp. 914-918 (Feb. 21, 2008). [cited by applicant]
Mahe, I.; Chidac, J.; Helfer, H.; Nobel, S. J. Thromb. Haemost. 2016, 14, 2017. [cited by applicant]
Man et al., “Tolerance of the liver to intermittent pringle maneuver in hepatectomy for liver tumors.” JAMA Sirgery, vol. 134, pp. 533-539 (1999). [cited by applicant]
Martinez-Gonzalez et al., “New Challenges for a Second-Generation Low-Molecular-Weight Heparin: Focus on Bemiparin,” Expert Rev. Cardiovasc. Ther., vol. 8, No. 5, pp. 625-634 (2010). [cited by applicant]
Maza, S., et al., “Synthesis of chondroitin/dermatan sulfate-like oligosaccharides and evaluation of their protein affinity by fluorescence polarization.” Org. Biomol. Chem., vol. 11, pp. 3510-3525 (2013). [cited by applicant]
Mazany et al., “Human chondroitin 6-sulfotransferase: cloning, gene structure, and chromosomal localization,” Biochimica et Biophysica Acta, vol. 1407, pp. 92-97 (1998). [cited by applicant]
McGowan, K. E.; Makari, J.; Diamantouros, A.; Bucci, C.; Rempel, P.; Selby, R.; Geerts, W. Blood 2016, 127, 1954. [cited by applicant]
Miyachi et al., “Syntheses of chondroitin sulfate tetrasaccharide structures containing 4,6-disulfate patterns and analysis of their interaction with glycosaminoglycan-binding protein.” Bioorg. Med. Chem. Lett., vol. 25… [cited by applicant]
Miyata et al., “Persistent cortical plasticity by upregulation of chondroitin 6-sulfation.” Nat. Neurosci., vol. 15, pp. 414-422 (2012). [cited by applicant]
Mizumoto et al., “Molecular interactions between chondroitin-dermatan sulfate and growth factors/receptors/matrix proteins.” Curr. Opin. Struct. Biol., vol. 34, pp. 35-42 (2015). [cited by applicant]
Monneau et al., “The sweet spot: how GAGs help chemokines guide migrating cells.” J. Leukoc. Biol. vol. 99, pp. 935-953 (2016). [cited by applicant]
Moon et al., “Dissecting the substrate recognition of 3-O-suflotransferase for the biosynthesis of anticoagulant heparin,” Proceedings of the National Academy of Sciences, vol. 109, No. 14, pp. 5265-5270 (2012). [cited by applicant]
Mossanen et al., “Acetaminophen-induced acute liver injury in mice.” Lab. Anim. vol. 49, pp. 30-36 (2015). [cited by applicant]
Mousa, “Drug Discovery and Evaluation: Pharmacological Assays” (ed. Vogel, H.), 393-456 (Springer-Verlag Berlin, Heidelberg, New York (2008). [cited by applicant]
Mousa, “Heparin and Low-Molecular Weight Heparins in Thrombosis and Beyond,” Meth. Mol. Biol., vol. 663, pp. 109-132 (2010). [cited by applicant]
Mousa, “In Vitro Methods of Evaluating Antithrombotics and Thrombolytics,” Meth. Mol. Biol., vol. 663, pp. 1-28 (2010). [cited by applicant]
Munoz et al., “Enzymatic synthesis of heparin related polysaccharides on sensor chips: Rapid screening of heparin-protein interactions,” Biochemical and Biophysical Research Communications, Academic Press Inc., Orlando,… [cited by applicant]
Nadanaka et al., “Characteristic Hexasaccharide Sequences in Octasaccharides Derived from Shark Cartilage Chondroitin Sulfate D with a Neurite Outgrowth Promoting Activity,” The Journal of Biological Chemistry, vol. 273… [cited by applicant]
Nagano et al., “Chondroitin sulfate protects vascular endothelial cells from toxicities of extracellular histones.” Eur. J. Pharmacol., vol. 826, pp. 48-55 (2018). [cited by applicant]
Nam et al., “Syndecan-1 Limits the Progression of Liver Injury and Promotes Liver Repair in Acetaminophen-Induced Liver Injury in Mice.” Hepatology, vol. 66(5), pp. 1601-1615, doi: 10.1002/hep.29265 (2017). [cited by applicant]
Nastuk et al., “Expression Cloning and Characterization of NSIST, a Novel Sulfotransferase Expressed by a Subset of Neurons and Postsynaptic Targets,” The Journal of Neuroscience, vol. 18, No. 18, pp. 7167-7177 (Sep. 15… [cited by applicant]
Nelson, R.M., et al., “Heparin Oligosaccharides Bind L- and P-Selectin and Inhibit Acute Inflammation,” Blood, vol. 82, No. 11, pp. 3253-3258, Dec. 1, 1993. [cited by applicant]
Noti et al., “Chemical Approaches to Define the Review Structure-Activity Relationship of Heparin-like Glycosaminoglycans,” Chemistry & Biology, vol. 12, pp. 731-756 (Jul. 2005). [cited by applicant]
Notice of Allowance and Interview Summary corresponding to U.S. Appl. No. 14/898,865 dated Dec. 15, 2017. [cited by applicant]
Notice of Allowance and Interview Summary corresponding to U.S. Appl. No. 17/254,145 dated Jan. 30, 2023. [cited by applicant]
Notice of Allowance corresponding to U.S. Appl. No. 17/254,145 dated Dec. 8, 2022. [cited by applicant]
Notice of Allowance corresponding to U.S. Appl. No. 16/492,858 dated Sep. 12, 2022. [cited by applicant]
Notice of Allowance corresponding to U.S. Appl. No. 16/492,858 dated Feb. 10, 2023. [cited by applicant]
Notice of Allowance corresponding to U.S. Appl. No. 16/761,159 dated Aug. 24, 2023. [cited by applicant]
Notice of Allowance corresponding to U.S. Appl. No. 16/761,159 dated Dec. 4, 2023. [cited by applicant]
Notice of Allowance corresponding to U.S. Appl. No. 16/492,858 dated May 24, 2023. [cited by applicant]
Notice of Allowance corresponding to U.S. Appl. No. 16/492,858 dated Sep. 7, 2023. [cited by applicant]
Notice of Allowance corresponding to U.S. Appl. No. 16/492,858 dated Dec. 21, 2023. [cited by applicant]
Notice of Publication Corresponding to European Patent Application. No. 19822610.2 dated Mar. 31, 2021. [cited by applicant]
Notice of Publication Corresponding to European Patent application No. 18764628.6 dated Nov. 20, 2019. [cited by applicant]
Notice of Publication Corresponding to European Patent Application No. 18873131.9 dated Jul. 15, 2020. [cited by applicant]
Oduah et al., “Heparin: Past, present, and future.” Pharmaceuticals (Basel), vol. 9, Article No. 38 (2016). [cited by applicant]
Office Action (Annex to the communication) corresponding to European Patent Application No. 18873131.9 dated Apr. 4, 2024, 7 Pages. [cited by applicant]
Office Action (Decision to grant) corresponding to European Patent Application No. 18873131.9 dated Feb. 13, 2025, 3 Pages. [cited by applicant]
Office Action (Decision of Rejection) corresponding to Chinese Patent Application No. 20180020095.X dated Dec. 1, 2022, p. 10 (Translation). [cited by applicant]
Office Action (Final) corresponding to U.S. Appl. No. 16/625,342 dated Nov. 4, 2022. [cited by applicant]
Office Action (Non- Final Rejection) corresponding to U.S. Appl. No. 18/138,596 dated Jun. 5, 2024. [cited by applicant]
Office Action (Non- Final Rejection) corresponding to U.S. Appl. No. 18/406,942 dated Aug. 12, 2024. [cited by applicant]
Office Action (Notice of Allowance) corresponding to U.S. Appl. No. 16/625,342 dated Jan. 10, 2024. [cited by applicant]
Office Action (Notice of Allowance) corresponding to U.S. Appl. No. 16/625,342 dated Jan. 19, 2024. [cited by applicant]
Office Action (Notice of Allowance) corresponding to U.S. Appl. No. 16/625,342 dated Apr. 26, 2024. [cited by applicant]
Office Action (Notice of Reasons for Rejection) corresponding to Japanese Patent Application No. 2020-570916 dated Jun. 20, 2023. [cited by applicant]
Office Action (Notice of Reasons for Rejection) corresponding to Japanese Patent Application No. 2020-570916 dated Jan. 16, 2024. [cited by applicant]
Office Action (Notice of Reasons for Rejection) corresponding to Japanese Patent Application No. 2023-129964 dated Oct. 8, 2024, 14 pages. [cited by applicant]
Office Action (Notice of Reasons for Rejection) corresponding to Japanese Patent Application No. 2022-527682 dated Oct. 29, 2024, p. 8. [cited by applicant]
Office Action (Restriction Requirement) corresponding to U.S. Appl. No. 16/625,342 dated Dec. 16, 2021. [cited by applicant]
Office Action (Restriction Requirement) corresponding to U.S. Appl. No. 17/254,145 dated Nov. 26, 2021. [cited by applicant]
Office Action (Restriction Requirement) corresponding to U.S. Appl. No. 16/761,159 dated Jun. 10, 2022. [cited by applicant]
Office Action (Restriction Requirement) corresponding to U.S. Appl. No. 16/492,858 dated Jun. 30, 2021. [cited by applicant]
Office Action (Restriction Requirement) corresponding to U.S. Appl. No. 18/222,910 dated Dec. 6, 2024, 9 Pages. [cited by applicant]
Office Action (Restriction Requirement) corresponding to U.S. Appl. No. 18/222,910 dated Feb. 26, 2025, 11 Pages. [cited by applicant]
Office Action corresponding to Chinese Application No. 202080092829.2 dated Jun. 21, 2023. [cited by applicant]
Office Action (Decision of Rejection) corresponding to Chinese Application No. 202080092829.2 dated Mar. 3, 2024, p. 19. [cited by applicant]
Office Action corresponding to Chinese Patent Application No. 201880020095.X dated Jun. 8, 2022. [cited by applicant]
Office Action corresponding to Chinese Patent Application No. 201480044429.9 dated Aug. 30, 2018, p. 43. [cited by applicant]
Office Action corresponding to Chinese Patent Application No. 201480044429.9 dated Apr. 9, 2019. [cited by applicant]
Office Action corresponding to Chinese Patent Application No. 201480044429.9 dated Mar. 3, 2020. [cited by applicant]
Office Action corresponding to Chinese Patent Application No. 201880020095.X dated Sep. 22, 2021. [cited by applicant]
Office Action corresponding to Chinese Patent Application No. 2018800850125 dated Jan. 20, 2023. [cited by applicant]
Office Action corresponding to Chinese Patent Application No. 201880020095.X dated Apr. 18, 2023. [cited by applicant]
Office Action corresponding to Chinese Patent Application No. 201980044697.3 dated Jul. 7, 2023. [cited by applicant]
Office Action corresponding to Chinese Patent Application No. 201880085012.5 dated Nov. 30, 2023. [cited by applicant]
Office Action corresponding to Chinese patent Application No. 202310342719.2 dated May 8, 2023. [cited by applicant]
Office Action corresponding to Chinese Patent Application No. 202080092 dated Jun. 21, 2023. [cited by applicant]
Office Action corresponding to Chinese patent Application No. 202310342719.2 dated Feb. 28, 2024. [cited by applicant]
Office Action corresponding to Chinese patent Application No. 202310342719.2 dated Jul. 24, 2024, 8 Pages. [cited by applicant]
Office Action corresponding to Chinese patent Application No. 202310342719.2 dated Oct. 16, 2024, p. 11. [cited by applicant]
Office Action corresponding to European Patent Application No. 11849994.6 dated May 24, 2018. [cited by applicant]
Office Action corresponding to European Patent Application No. 11849994.6 dated Jan. 22, 2020. [cited by applicant]
Office Action corresponding to European Patent Application No. 14812890.3 dated Jun. 23, 2020. [cited by applicant]
Office Action corresponding to European Patent Application No. 18873131.9-1112 dated Aug. 14, 2023. [cited by applicant]
Office Action corresponding to European Patent Application No. 18764628.6 dated Nov. 16, 2023. [cited by applicant]
Office Action corresponding to Japanese Patent Application No. 2019-549419 dated Dec. 23, 2022, p. 3. [cited by applicant]
Office Action corresponding to Japanese Patent Application No. 2016-521505 dated Jul. 19, 2018. [cited by applicant]
Office Action corresponding to Japanese Patent Application No. 2016-521505 dated Jun. 21, 2019. [cited by applicant]
Office Action corresponding to Japanese Patent Application No. 2019-549419 dated Mar. 22, 2022. [cited by applicant]
Office Action corresponding to Japanese Patent Application No. 2020-544568 dated Jan. 10, 2023. [cited by applicant]
Office Action corresponding to Japanese Patent Application No. 2024-008526 dated Dec. 24, 2024, p. 4. [cited by applicant]
Office Action Corresponding to Japanese Patent Application Serial No. 2020-544568 dated Sep. 26, 2023. [cited by applicant]
Office Action corresponding to U.S. Appl. No. 12/178,434 dated Oct. 28, 2011. [cited by applicant]
Office Action corresponding to U.S. Appl. No. 12/178,434 dated Apr. 19, 2011. [cited by applicant]
Office Action corresponding to U.S. Appl. No. 12/178,434 dated Jan. 26, 2011. [cited by applicant]
Office Action corresponding to U.S. Appl. No. 16/492,858 dated Jan. 13, 2022. [cited by applicant]
Office Action corresponding to U.S. Appl. No. 16/625,342 dated Mar. 21, 2022. [cited by applicant]
Office Action corresponding to U.S. Appl. No. 16/761,159 dated Jan. 11, 2023. [cited by applicant]
Office Action corresponding to U.S. Appl. No. 17/254,145 dated Feb. 16, 2022. [cited by applicant]
Office Action corresponding to U.S. Appl. No. 13/996,930 dated Oct. 8, 2015. [cited by applicant]
Office Action corresponding to U.S. Appl. No. 13/996,930 dated May 26, 2016. [cited by applicant]
Office Action corresponding to U.S. Appl. No. 13/996,930 dated Dec. 21, 2017. [cited by applicant]
Office Action corresponding to U.S. Appl. No. 13/996,930 dated Jul. 30, 2018. [cited by applicant]
Office Action corresponding to U.S. Appl. No. 13/996,930 dated Nov. 22, 2019. [cited by applicant]
Office Action corresponding to U.S. Appl. No. 16/625,342 dated Jun. 15, 2023. [cited by applicant]
Official Action corresponding to U.S. Appl. No. 14/898,865 dated Mar. 23, 2017. [cited by applicant]
Oliveira et al., “Neutrophils: a cornerstone of liver ischemia and reperfusion injury.” Lab. Invest., vol. 96, pp. 51-62 (2018). [cited by applicant]
Ong et al., “Expression Cloning of a Human Sulfotransferase that Directs the Synthesis of the HNK-1 Glycan on the Neural Cell Adhesion Molecule and Glycolipids,” The Journal of Biological Chemistry, vol. 273, No. 9, pp.… [cited by applicant]
Onufriev, A; Bashford, D.; Case, D. A Proteins 2004, 55, 383. [cited by applicant]
Ouyang et al., “Molecular Cloning and Expression of Human and Mouse Tyrosylprotein Sulfotransferase-2 and a Tyrosylprotein Sulfotransferase Homologue in Caenorhabditis elegans,” The Journal of Biological Chemistry, vol.… [cited by applicant]
Park et al., “Cell surface heparan sulfate proteoglycans: selective regulators of ligand-receptor encounters.” J. Biol. Chem. vol. 275, pp. 29923-29926 (2000). [cited by applicant]
Patel, V. N.; Lombaert, I. M.A.; Cowherd, S. N.; Shworak, N.; Xu, Y.; Liu, J.; Hoffman, M. P. Developmental Cell 2014, 29, 662. [cited by applicant]
Pempe, et al., “Probing Structural Selectivity of Synthetic Heparin Binding to Stabilin Protein Receptors,” Journal of Biol. Chem., vol. 287, No. 25, pp. 20774-20783 (Jun. 15, 2012). [cited by applicant]
Pettersen, E. F.; Goddard, T. D.; Huang, C. C.; Couch, G. S.; Greenblatt, D. M.; Meng. E. C.; Ferrin, T. E. J. Comp. Chem. 2004, 25, 1605. [cited by applicant]
Pierce et al., “Inflammatory response to trauma: implications for coagulation and resuscitation.” Curr. Opin. Anesthesio., vol. 27, pp. 246-252 (2014). [cited by applicant]
Proudfoot et al., “Glycosaminoglycan binding and oligomerization are essential for the in vivo activity of certain chemokines.” Proc. Natl. Acad. Sci. USA vol. 100, pp. 1885-1890 (2003). [cited by applicant]
Pulsipher et al., “Directing Neuronal Signaling through Cell-Surface Glycan Engineering.” J. Am. Chem. Soc., vol. 136, pp. 6794-6797 (2014). [cited by applicant]
Raman, R.; Venkataraman, G.; Ernst, S.; Sasisekharan, R. Proc. Natl. Acad. Scl. 2003, 100, 2357. [cited by applicant]
Razi et al., “Structural and functional properties of heparin analogues obtained by chemical sulphation of [cited by applicant]
Rejection decision corresponding to Chinese Patent Application No. 201880085012.5 dated Feb. 23, 2024. [cited by applicant]
Rohrmann et al., “Two N-acetylgalactosaminyltransferase are involved in the biosynthesis of chondroitin sulfate,” European Journal of Biochemistry, vol. 148, pp. 463-469 (1985). [cited by applicant]
Roman-Blas et al., “The combined therapy with chondroitin sulfate plus glucosamine sulfate or chondroitin sulfate plus glucosamine hydrochloride does not improve joint damage in an experimental model of knee osteoarthri… [cited by applicant]
Rosenberg et al., “Heparan Sulfate Proteoglycans of the Cardiovascular System Specific Structures Emerge But How Is Synthesis Regulated?” J. Clin. Invest., vol. 99, No. 9, pp. 2062-2070 (May 1997). [cited by applicant]
Saeki et al., “Molecular Cloning, Expression, and Characterization of a Novel Mouse Liver SULTIBI Sulfotransferase,” J. Biochem., vol. 124, pp. 55-64 (1998). [cited by applicant]
Sala et al., “UDP-N-trifluoroacetylglucosamine as an alternative substrate in N-acetylglucosaminyltransferase reactions”, Carbohydrate Research, vol. 306, pp. 127-136 (1998). [cited by applicant]
Sarris et al., “Inflammatory chemokines direct and restrict leukocyte migration within live tissues as glycan-bound gradients.” Curr. Biol. vol. 22, pp. 2375-2382 (2012). [cited by applicant]
Sattelle, B. M., et al., “Free energy landscapes of iduronic acid and related monosaccharides,” J Am Chem Soc, vol. 132, pp. 13132-13134, Sep. 29, 2010. [cited by applicant]
Sattelle, B. M.; Almond, A. Glycobiology 2011, 21, 1651. [cited by applicant]
Schroeder et al., “Protamine neutralization of low molecular weight heparins and their oligosaccharide components,” Anal Bioanal Chem, vol. 399, pp. 763-771 (2011). [cited by applicant]
Schworer, R.; Zubkova, 0. V.; Turnbull, J. E.; Tyler, P. C. Chem. Eur. J. 2013, 19, 6817. [cited by applicant]
Sheng et al., “The Dominating Role of N-Deacetylase/N-Sulfotransferase 1 in Forming Domain Structures in Heparan Sulfate,” The Journal of Biological Chemistry, vol. 286, No. 22, pp. 19768-19776 (Jun. 3, 2011). [cited by applicant]
Shiori et al., “Sequence determination of synthesized chondroitin sulfate dodecasaccharides.” Glycobiology, vol. 26, pp. 592-606 (2016). [cited by applicant]
Shively et al., “Formation of Anhydrosugars in the Chemical Depolymerization of Heparin,” Biochemistry, vol. 15, No. 18, pp. 3932-3942 (1976). [cited by applicant]
Shriver et al., “Glycomics: a Pathway to a Class of New and Improved Therapeutics,” Nat. Rev. Drug Discov., vol. 3, pp. 863-873 (Oct. 2004). [cited by applicant]
Shriver, Z., et al., “Heparin and Heparan Sulfate: Analyzing Structure and Microheterogeneity,” Handb Exp. Pharmacol, 207, pp. 159-176. (2012). [cited by applicant]
Shukla et al., “A Novel Role for 3-O-Sulfated Heparan Sulfate in Herpes Simplex Virus 1 Entry,” Cell, vol. 99, pp. 13-22 (Oct. 1, 1999). [cited by applicant]
Shukla et al., “Herpesviruses and heparan sulfate: an intimate relationship in aid of viral entry,” The Journal of Clinical Investigation, vol. 108, No. 4, pp. 503-510 (Aug. 2001). [cited by applicant]
Shworak et al., “Molecular Cloning and Expression of Mouse and Human cDNAs Encoding Heparan Sulfate D-Glucosaminyl 3-O-Sulfotransferase,” The Journal of Biological Chemistry, vol. 272, No. 44), pp. 28008-28019 (1997). [cited by applicant]
Silk, E., et al., “The role of extracellular histone in organ injury”, Cell Death & Disease, vol. 8, No. 5, 1, e2812, pp. 1-11 May 1, 2017. [cited by applicant]
Singh, A; Tessier, M. B.; Pederson, K.; Wang, X.; Venot, A P.; Boons, G.-J.; Prestegard, J. H.; Woods, R. J. Can. J. Chem. 2016, 10.1139/cjc. [cited by applicant]
Sismey-Ragatz, et al, “Chemoenzymatic Synthesis with Distinc Pasteurella Heparosan Synthases,” J. Biol. Chem., vol. 282, No. 39, pp. 28321-28327 (Jul. 11, 2007). [cited by applicant]
Solera et al., “Chondroitin sulfate tetrasaccharides: synthesis, three-dimensional structure and interaction with midkine.” Chemistry, vol. 22, pp. 2356-2369 (2016). [cited by applicant]
Sommers, C.D., et al., “Heparin and homogeneous model heparin oligosaccharides form distinct complexes with protamine: Light scattering and zeta potential analysis,” Journal of Pharmaceutical and Biomedical Analysis, vo… [cited by applicant]
Stabler et al., “Chondroitin sulphate Inhibits NF-κB activity induced by interaction of pathogenic and damage associated molecules.” Osteoarthritis and Cartilage, vol. 25, pp. 166-174 (2017). [cited by applicant]
STN record for Chen et al., dissertation, “Towards de novo synthesis of structure-defined oligosaccharides with heparan sulfate u biosynthetic enzymes”, entered into STN: Apr. 20, 2009. 1 page. [cited by applicant]